Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NME8Q8N427 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NME8Q8N427 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NME8Q8N427 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NME8Q8N427 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.21■□□□□ 0.83
NME8Q8N427 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.21■□□□□ 0.83
NME8Q8N427 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NME8Q8N427 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.21■□□□□ 0.83
NME8Q8N427 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.21■□□□□ 0.83
NME8Q8N427 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.21■□□□□ 0.83
NME8Q8N427 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.21■□□□□ 0.83
NME8Q8N427 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NME8Q8N427 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.21■□□□□ 0.83
NME8Q8N427 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NME8Q8N427 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NME8Q8N427 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NME8Q8N427 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NME8Q8N427 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.21■□□□□ 0.83
NME8Q8N427 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
NME8Q8N427 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NME8Q8N427 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NME8Q8N427 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NME8Q8N427 AC112777.1-201ENST00000540175 1423 ntBASIC20.2■□□□□ 0.82
NME8Q8N427 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NME8Q8N427 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.2■□□□□ 0.82
NME8Q8N427 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.2■□□□□ 0.82
NME8Q8N427 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NME8Q8N427 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NME8Q8N427 KRT17P6-201ENST00000453795 1220 ntBASIC20.2■□□□□ 0.82
NME8Q8N427 VENTXP7-201ENST00000475503 772 ntBASIC20.2■□□□□ 0.82
NME8Q8N427 FOSL1P1-201ENST00000511041 816 ntBASIC20.2■□□□□ 0.82
NME8Q8N427 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.2■□□□□ 0.82
NME8Q8N427 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NME8Q8N427 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.2■□□□□ 0.82
NME8Q8N427 AC074051.2-201ENST00000565115 352 ntBASIC20.2■□□□□ 0.82
NME8Q8N427 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NME8Q8N427 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NME8Q8N427 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.2■□□□□ 0.82
NME8Q8N427 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NME8Q8N427 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
NME8Q8N427 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NME8Q8N427 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NME8Q8N427 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NME8Q8N427 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NME8Q8N427 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NME8Q8N427 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NME8Q8N427 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NME8Q8N427 AC120498.9-201ENST00000339021 3867 ntBASIC20.2■□□□□ 0.82
NME8Q8N427 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NME8Q8N427 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.19■□□□□ 0.82
NME8Q8N427 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NME8Q8N427 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.19■□□□□ 0.82
NME8Q8N427 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NME8Q8N427 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NME8Q8N427 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.19■□□□□ 0.82
NME8Q8N427 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NME8Q8N427 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.19■□□□□ 0.82
NME8Q8N427 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NME8Q8N427 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NME8Q8N427 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NME8Q8N427 IGHV3-47-201ENST00000425060 335 ntBASIC20.19■□□□□ 0.82
NME8Q8N427 AC246785.2-201ENST00000432512 513 ntBASIC20.19■□□□□ 0.82
NME8Q8N427 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
NME8Q8N427 KRT18P31-201ENST00000506277 1292 ntBASIC20.19■□□□□ 0.82
NME8Q8N427 AC113404.2-201ENST00000507884 177 ntBASIC20.19■□□□□ 0.82
NME8Q8N427 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.19■□□□□ 0.82
NME8Q8N427 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NME8Q8N427 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
NME8Q8N427 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.19■□□□□ 0.82
NME8Q8N427 IFNL4P1-201ENST00000607083 540 ntBASIC20.19■□□□□ 0.82
NME8Q8N427 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.19■□□□□ 0.82
NME8Q8N427 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NME8Q8N427 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NME8Q8N427 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NME8Q8N427 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NME8Q8N427 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NME8Q8N427 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.19■□□□□ 0.82
NME8Q8N427 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NME8Q8N427 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NME8Q8N427 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.19■□□□□ 0.82
NME8Q8N427 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.19■□□□□ 0.82
NME8Q8N427 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NME8Q8N427 AC009102.3-201ENST00000623118 1491 ntBASIC20.18■□□□□ 0.82
NME8Q8N427 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NME8Q8N427 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NME8Q8N427 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.18■□□□□ 0.82
NME8Q8N427 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.18■□□□□ 0.82
NME8Q8N427 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NME8Q8N427 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NME8Q8N427 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.18■□□□□ 0.82
NME8Q8N427 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NME8Q8N427 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NME8Q8N427 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NME8Q8N427 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NME8Q8N427 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NME8Q8N427 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.18■□□□□ 0.82
NME8Q8N427 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.18■□□□□ 0.82
NME8Q8N427 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NME8Q8N427 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
NME8Q8N427 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms