Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 AC104390.1-201ENST00000555663 520 ntBASIC19.91■□□□□ 0.78
VPS52Q8N1B4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 AC010240.3-201ENST00000607688 395 ntBASIC19.91■□□□□ 0.78
VPS52Q8N1B4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VPS52Q8N1B4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 HOXB1-202ENST00000577092 1414 ntBASIC19.9■□□□□ 0.78
VPS52Q8N1B4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VPS52Q8N1B4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.89■□□□□ 0.78
VPS52Q8N1B4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
VPS52Q8N1B4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VPS52Q8N1B4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS52Q8N1B4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS52Q8N1B4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS52Q8N1B4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS52Q8N1B4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.89■□□□□ 0.77
VPS52Q8N1B4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS52Q8N1B4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.89■□□□□ 0.77
VPS52Q8N1B4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VPS52Q8N1B4 DRAXINP1-201ENST00000437611 948 ntBASIC19.89■□□□□ 0.77
VPS52Q8N1B4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.89■□□□□ 0.77
VPS52Q8N1B4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.89■□□□□ 0.77
VPS52Q8N1B4 AP000867.3-201ENST00000524675 377 ntBASIC19.89■□□□□ 0.77
VPS52Q8N1B4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
VPS52Q8N1B4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VPS52Q8N1B4 TPSP2-201ENST00000561760 610 ntBASIC19.89■□□□□ 0.77
VPS52Q8N1B4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VPS52Q8N1B4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.89■□□□□ 0.77
VPS52Q8N1B4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.89■□□□□ 0.77
VPS52Q8N1B4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VPS52Q8N1B4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
VPS52Q8N1B4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms