Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLX4Q8IY92 RNF151-202ENST00000569210 853 ntTSL 2 BASIC22.32■■□□□ 1.16
SLX4Q8IY92 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLX4Q8IY92 AL158211.5-201ENST00000623583 2518 ntBASIC22.32■■□□□ 1.16
SLX4Q8IY92 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLX4Q8IY92 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SLX4Q8IY92 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
SLX4Q8IY92 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SLX4Q8IY92 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC22.32■■□□□ 1.16
SLX4Q8IY92 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SLX4Q8IY92 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC22.31■■□□□ 1.16
SLX4Q8IY92 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC22.31■■□□□ 1.16
SLX4Q8IY92 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.31■■□□□ 1.16
SLX4Q8IY92 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC22.31■■□□□ 1.16
SLX4Q8IY92 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC22.31■■□□□ 1.16
SLX4Q8IY92 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC22.31■■□□□ 1.16
SLX4Q8IY92 NKAPP1-205ENST00000585790 367 ntBASIC22.31■■□□□ 1.16
SLX4Q8IY92 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC22.31■■□□□ 1.16
SLX4Q8IY92 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC22.31■■□□□ 1.16
SLX4Q8IY92 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SLX4Q8IY92 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
SLX4Q8IY92 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLX4Q8IY92 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SLX4Q8IY92 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC22.31■■□□□ 1.16
SLX4Q8IY92 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLX4Q8IY92 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SLX4Q8IY92 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SLX4Q8IY92 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SLX4Q8IY92 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
SLX4Q8IY92 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC22.31■■□□□ 1.16
SLX4Q8IY92 AC002347.1-201ENST00000569543 541 ntBASIC22.31■■□□□ 1.16
SLX4Q8IY92 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC22.31■■□□□ 1.16
SLX4Q8IY92 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.31■■□□□ 1.16
SLX4Q8IY92 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.31■■□□□ 1.16
SLX4Q8IY92 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLX4Q8IY92 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SLX4Q8IY92 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.3■■□□□ 1.16
SLX4Q8IY92 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SLX4Q8IY92 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.3■■□□□ 1.16
SLX4Q8IY92 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLX4Q8IY92 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLX4Q8IY92 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLX4Q8IY92 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC22.3■■□□□ 1.16
SLX4Q8IY92 RNA5SP416-201ENST00000516838 111 ntBASIC22.3■■□□□ 1.16
SLX4Q8IY92 AC105339.3-201ENST00000560043 636 ntBASIC22.3■■□□□ 1.16
SLX4Q8IY92 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC22.3■■□□□ 1.16
SLX4Q8IY92 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLX4Q8IY92 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLX4Q8IY92 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SLX4Q8IY92 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
SLX4Q8IY92 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLX4Q8IY92 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.3■■□□□ 1.16
SLX4Q8IY92 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SLX4Q8IY92 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.3■■□□□ 1.16
SLX4Q8IY92 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
SLX4Q8IY92 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLX4Q8IY92 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLX4Q8IY92 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC22.29■■□□□ 1.16
SLX4Q8IY92 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC22.29■■□□□ 1.16
SLX4Q8IY92 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC22.29■■□□□ 1.16
SLX4Q8IY92 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SLX4Q8IY92 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SLX4Q8IY92 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
SLX4Q8IY92 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLX4Q8IY92 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.29■■□□□ 1.16
SLX4Q8IY92 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SLX4Q8IY92 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLX4Q8IY92 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.29■■□□□ 1.16
SLX4Q8IY92 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLX4Q8IY92 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SLX4Q8IY92 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SLX4Q8IY92 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.29■■□□□ 1.16
SLX4Q8IY92 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLX4Q8IY92 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SLX4Q8IY92 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
SLX4Q8IY92 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
SLX4Q8IY92 AC009947.1-201ENST00000444350 727 ntBASIC22.29■■□□□ 1.16
SLX4Q8IY92 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SLX4Q8IY92 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLX4Q8IY92 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLX4Q8IY92 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC22.28■■□□□ 1.16
SLX4Q8IY92 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC22.28■■□□□ 1.16
SLX4Q8IY92 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.28■■□□□ 1.16
SLX4Q8IY92 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SLX4Q8IY92 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.28■■□□□ 1.16
SLX4Q8IY92 CTNS-203ENST00000399306 803 ntTSL 3 BASIC22.28■■□□□ 1.16
SLX4Q8IY92 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.28■■□□□ 1.16
SLX4Q8IY92 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC22.28■■□□□ 1.16
SLX4Q8IY92 ALG1L5P-201ENST00000482043 771 ntBASIC22.28■■□□□ 1.16
SLX4Q8IY92 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC22.28■■□□□ 1.16
SLX4Q8IY92 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC22.28■■□□□ 1.16
SLX4Q8IY92 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.28■■□□□ 1.16
SLX4Q8IY92 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SLX4Q8IY92 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SLX4Q8IY92 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLX4Q8IY92 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SLX4Q8IY92 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SLX4Q8IY92 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.28■■□□□ 1.16
SLX4Q8IY92 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SLX4Q8IY92 COA5-202ENST00000409997 557 ntTSL 4 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms