Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
UBR1Q8IWV7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC26.02■■□□□ 1.76
UBR1Q8IWV7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC26.02■■□□□ 1.76
UBR1Q8IWV7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
UBR1Q8IWV7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC26.02■■□□□ 1.76
UBR1Q8IWV7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
UBR1Q8IWV7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
UBR1Q8IWV7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
UBR1Q8IWV7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC26.02■■□□□ 1.76
UBR1Q8IWV7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC26.02■■□□□ 1.76
UBR1Q8IWV7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
UBR1Q8IWV7 AC254562.1-201ENST00000417586 456 ntBASIC26.02■■□□□ 1.76
UBR1Q8IWV7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
UBR1Q8IWV7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
UBR1Q8IWV7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
UBR1Q8IWV7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
UBR1Q8IWV7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
UBR1Q8IWV7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC26.01■■□□□ 1.75
UBR1Q8IWV7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC26.01■■□□□ 1.75
UBR1Q8IWV7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
UBR1Q8IWV7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC26.01■■□□□ 1.75
UBR1Q8IWV7 AC027612.4-201ENST00000605371 583 ntBASIC26.01■■□□□ 1.75
UBR1Q8IWV7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
UBR1Q8IWV7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
UBR1Q8IWV7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
UBR1Q8IWV7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
UBR1Q8IWV7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
UBR1Q8IWV7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC26■■□□□ 1.75
UBR1Q8IWV7 KRT18P65-201ENST00000439811 1286 ntBASIC26■■□□□ 1.75
UBR1Q8IWV7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC26■■□□□ 1.75
UBR1Q8IWV7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC26■■□□□ 1.75
UBR1Q8IWV7 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
UBR1Q8IWV7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
UBR1Q8IWV7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
UBR1Q8IWV7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
UBR1Q8IWV7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
UBR1Q8IWV7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC26■■□□□ 1.75
UBR1Q8IWV7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC26■■□□□ 1.75
UBR1Q8IWV7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
UBR1Q8IWV7 HTR5BP-201ENST00000430851 1154 ntBASIC26■■□□□ 1.75
UBR1Q8IWV7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC26■■□□□ 1.75
UBR1Q8IWV7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC26■■□□□ 1.75
UBR1Q8IWV7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC26■■□□□ 1.75
UBR1Q8IWV7 AC073592.4-201ENST00000623827 446 ntBASIC26■■□□□ 1.75
UBR1Q8IWV7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 AL596442.2-201ENST00000610240 980 ntBASIC25.99■■□□□ 1.75
UBR1Q8IWV7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC25.99■■□□□ 1.75
UBR1Q8IWV7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC25.98■■□□□ 1.75
UBR1Q8IWV7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
UBR1Q8IWV7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC25.98■■□□□ 1.75
UBR1Q8IWV7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC25.98■■□□□ 1.75
UBR1Q8IWV7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC25.98■■□□□ 1.75
UBR1Q8IWV7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC25.98■■□□□ 1.75
UBR1Q8IWV7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
UBR1Q8IWV7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC25.98■■□□□ 1.75
UBR1Q8IWV7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC25.98■■□□□ 1.75
UBR1Q8IWV7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC25.98■■□□□ 1.75
UBR1Q8IWV7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC25.98■■□□□ 1.75
UBR1Q8IWV7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
UBR1Q8IWV7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
UBR1Q8IWV7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC25.98■■□□□ 1.75
UBR1Q8IWV7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC25.97■■□□□ 1.75
UBR1Q8IWV7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC25.97■■□□□ 1.75
UBR1Q8IWV7 AC007967.3-201ENST00000434308 558 ntBASIC25.97■■□□□ 1.75
UBR1Q8IWV7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC25.97■■□□□ 1.75
UBR1Q8IWV7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC25.97■■□□□ 1.75
UBR1Q8IWV7 KRT18P2-201ENST00000447938 1258 ntBASIC25.97■■□□□ 1.75
UBR1Q8IWV7 AC112698.1-201ENST00000510299 916 ntBASIC25.97■■□□□ 1.75
UBR1Q8IWV7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
UBR1Q8IWV7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
UBR1Q8IWV7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC25.97■■□□□ 1.75
UBR1Q8IWV7 MIR1199-201ENST00000621445 119 ntBASIC25.97■■□□□ 1.75
UBR1Q8IWV7 AP000867.4-201ENST00000641616 219 ntBASIC25.97■■□□□ 1.75
UBR1Q8IWV7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
UBR1Q8IWV7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC25.97■■□□□ 1.75
UBR1Q8IWV7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
UBR1Q8IWV7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
UBR1Q8IWV7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC25.97■■□□□ 1.75
UBR1Q8IWV7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
UBR1Q8IWV7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
UBR1Q8IWV7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC25.97■■□□□ 1.75
UBR1Q8IWV7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms