Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 HNRNPDP1-201ENST00000439535 754 ntBASIC19.85■□□□□ 0.77
HERC6Q8IVU3 FGFR3P6-201ENST00000457012 610 ntBASIC19.85■□□□□ 0.77
HERC6Q8IVU3 SCARNA2-201ENST00000458748 420 ntBASIC19.85■□□□□ 0.77
HERC6Q8IVU3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 AC116407.3-201ENST00000623905 1129 ntBASIC19.85■□□□□ 0.77
HERC6Q8IVU3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 FEM1AP3-201ENST00000403722 1741 ntBASIC19.85■□□□□ 0.77
HERC6Q8IVU3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HERC6Q8IVU3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 AL691403.2-201ENST00000618460 490 ntBASIC19.84■□□□□ 0.77
HERC6Q8IVU3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HERC6Q8IVU3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.83■□□□□ 0.77
HERC6Q8IVU3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.83■□□□□ 0.77
HERC6Q8IVU3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HERC6Q8IVU3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.83■□□□□ 0.77
HERC6Q8IVU3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.83■□□□□ 0.77
HERC6Q8IVU3 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.83■□□□□ 0.77
HERC6Q8IVU3 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.83■□□□□ 0.77
HERC6Q8IVU3 RCN1P2-201ENST00000398357 915 ntBASIC19.83■□□□□ 0.77
HERC6Q8IVU3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HERC6Q8IVU3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.83■□□□□ 0.77
HERC6Q8IVU3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.83■□□□□ 0.77
HERC6Q8IVU3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.83■□□□□ 0.77
HERC6Q8IVU3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
HERC6Q8IVU3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.83■□□□□ 0.76
HERC6Q8IVU3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.83■□□□□ 0.76
HERC6Q8IVU3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HERC6Q8IVU3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HERC6Q8IVU3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HERC6Q8IVU3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HERC6Q8IVU3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
HERC6Q8IVU3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HERC6Q8IVU3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.83■□□□□ 0.76
HERC6Q8IVU3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
HERC6Q8IVU3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 RBM17P3-201ENST00000417687 1192 ntBASIC19.82■□□□□ 0.76
HERC6Q8IVU3 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 MTDHP3-201ENST00000594186 672 ntBASIC19.82■□□□□ 0.76
HERC6Q8IVU3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HERC6Q8IVU3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms