Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 SIRPAP1-201ENST00000448467 1770 ntBASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 AC069152.1-201ENST00000438030 544 ntBASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 MTDHP1-201ENST00000605323 784 ntBASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 AC012317.2-201ENST00000623305 2251 ntBASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NUDCD3Q8IVD9 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 UNC93B5-201ENST00000530315 699 ntBASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 AL445675.2-201ENST00000620291 557 ntBASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NUDCD3Q8IVD9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NUDCD3Q8IVD9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
NUDCD3Q8IVD9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
NUDCD3Q8IVD9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NUDCD3Q8IVD9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NUDCD3Q8IVD9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
NUDCD3Q8IVD9 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
NUDCD3Q8IVD9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
NUDCD3Q8IVD9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
NUDCD3Q8IVD9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NUDCD3Q8IVD9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
NUDCD3Q8IVD9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 KRT18P41-201ENST00000518924 1277 ntBASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.26■□□□□ 0.51
NUDCD3Q8IVD9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms