Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 AC116562.2-201ENST00000507042 360 ntBASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 REXO1L10P-201ENST00000615707 1290 ntBASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 REXO1L12P-201ENST00000622156 912 ntBASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
RNF111Q6ZNA4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 AC011506.1-201ENST00000474329 610 ntBASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 KRT8P41-201ENST00000533985 1514 ntBASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 PP12613-201ENST00000424958 2230 ntBASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF111Q6ZNA4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 FAM207BP-201ENST00000447172 505 ntBASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 AC091390.4-202ENST00000476426 537 ntBASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
RNF111Q6ZNA4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF111Q6ZNA4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF111Q6ZNA4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF111Q6ZNA4 AL499627.1-201ENST00000569373 2188 ntBASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms