Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf88Q6PI97 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 C1QBPP2-201ENST00000528754 825 ntBASIC16.02■□□□□ 0.16
C11orf88Q6PI97 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 AC069544.1-201ENST00000609399 999 ntBASIC16.02■□□□□ 0.16
C11orf88Q6PI97 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf88Q6PI97 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
C11orf88Q6PI97 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
C11orf88Q6PI97 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
C11orf88Q6PI97 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
C11orf88Q6PI97 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
C11orf88Q6PI97 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
C11orf88Q6PI97 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
C11orf88Q6PI97 ZNF815P-204ENST00000434898 1737 ntBASIC16.02■□□□□ 0.15
C11orf88Q6PI97 ANO7L1-203ENST00000602586 1720 ntBASIC16.02■□□□□ 0.15
C11orf88Q6PI97 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
C11orf88Q6PI97 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
C11orf88Q6PI97 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
C11orf88Q6PI97 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.02■□□□□ 0.15
C11orf88Q6PI97 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
C11orf88Q6PI97 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.01■□□□□ 0.15
C11orf88Q6PI97 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf88Q6PI97 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
C11orf88Q6PI97 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
C11orf88Q6PI97 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
C11orf88Q6PI97 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16■□□□□ 0.15
C11orf88Q6PI97 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16■□□□□ 0.15
C11orf88Q6PI97 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16■□□□□ 0.15
C11orf88Q6PI97 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
C11orf88Q6PI97 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
C11orf88Q6PI97 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
C11orf88Q6PI97 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16■□□□□ 0.15
C11orf88Q6PI97 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16■□□□□ 0.15
C11orf88Q6PI97 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
C11orf88Q6PI97 AC008764.6-201ENST00000595909 2069 ntBASIC16■□□□□ 0.15
C11orf88Q6PI97 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
C11orf88Q6PI97 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
C11orf88Q6PI97 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms