Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RNF220Q5VTB9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 C1QL1P1-201ENST00000568105 661 ntBASIC17.72■□□□□ 0.43
RNF220Q5VTB9 MTDHP1-201ENST00000605323 784 ntBASIC17.72■□□□□ 0.43
RNF220Q5VTB9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RNF220Q5VTB9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 BCL2-203ENST00000589955 5011 ntBASIC17.71■□□□□ 0.43
RNF220Q5VTB9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 AC004264.1-201ENST00000608354 794 ntBASIC17.71■□□□□ 0.43
RNF220Q5VTB9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF220Q5VTB9 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
RNF220Q5VTB9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
RNF220Q5VTB9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RNF220Q5VTB9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 ANO7L1-203ENST00000602586 1720 ntBASIC17.7■□□□□ 0.42
RNF220Q5VTB9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 KRT18P6-201ENST00000555540 1265 ntBASIC17.7■□□□□ 0.42
RNF220Q5VTB9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF220Q5VTB9 AC068418.2-201ENST00000577309 3703 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms