Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERC4Q5GLZ8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERC4Q5GLZ8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.54■□□□□ 0.88
HERC4Q5GLZ8 AP000593.1-201ENST00000393668 712 ntBASIC20.54■□□□□ 0.88
HERC4Q5GLZ8 KRT18P23-201ENST00000435622 1283 ntBASIC20.54■□□□□ 0.88
HERC4Q5GLZ8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.54■□□□□ 0.88
HERC4Q5GLZ8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.54■□□□□ 0.88
HERC4Q5GLZ8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.54■□□□□ 0.88
HERC4Q5GLZ8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERC4Q5GLZ8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HERC4Q5GLZ8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HERC4Q5GLZ8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HERC4Q5GLZ8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERC4Q5GLZ8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
HERC4Q5GLZ8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERC4Q5GLZ8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.54■□□□□ 0.88
HERC4Q5GLZ8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERC4Q5GLZ8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HERC4Q5GLZ8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.54■□□□□ 0.88
HERC4Q5GLZ8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 AL512604.3-201ENST00000569583 964 ntBASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 HOXB1-202ENST00000577092 1414 ntBASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
HERC4Q5GLZ8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.52■□□□□ 0.88
HERC4Q5GLZ8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HERC4Q5GLZ8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HERC4Q5GLZ8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.52■□□□□ 0.88
HERC4Q5GLZ8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HERC4Q5GLZ8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HERC4Q5GLZ8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HERC4Q5GLZ8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.52■□□□□ 0.88
HERC4Q5GLZ8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.52■□□□□ 0.88
HERC4Q5GLZ8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.52■□□□□ 0.88
HERC4Q5GLZ8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.52■□□□□ 0.88
HERC4Q5GLZ8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HERC4Q5GLZ8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
HERC4Q5GLZ8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HERC4Q5GLZ8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HERC4Q5GLZ8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.52■□□□□ 0.88
HERC4Q5GLZ8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HERC4Q5GLZ8 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.52■□□□□ 0.87
HERC4Q5GLZ8 KRT8P7-201ENST00000533003 1432 ntBASIC20.52■□□□□ 0.87
HERC4Q5GLZ8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.52■□□□□ 0.87
HERC4Q5GLZ8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HERC4Q5GLZ8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
HERC4Q5GLZ8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HERC4Q5GLZ8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.52■□□□□ 0.87
HERC4Q5GLZ8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HERC4Q5GLZ8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 AC099343.3-201ENST00000605834 2503 ntBASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 COX11P1-201ENST00000489116 835 ntBASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 AC112497.1-201ENST00000624824 639 ntBASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
HERC4Q5GLZ8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms