Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ODF4Q2M2E3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.3■□□□□ 0.2
ODF4Q2M2E3 RN7SL471P-201ENST00000580476 299 ntBASIC16.3■□□□□ 0.2
ODF4Q2M2E3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ODF4Q2M2E3 CR392000.1-201ENST00000624770 1228 ntBASIC16.3■□□□□ 0.2
ODF4Q2M2E3 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.3■□□□□ 0.2
ODF4Q2M2E3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ODF4Q2M2E3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ODF4Q2M2E3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ODF4Q2M2E3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ODF4Q2M2E3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
ODF4Q2M2E3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ODF4Q2M2E3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ODF4Q2M2E3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ODF4Q2M2E3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ODF4Q2M2E3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.3■□□□□ 0.2
ODF4Q2M2E3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.3■□□□□ 0.2
ODF4Q2M2E3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ODF4Q2M2E3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 AC004951.3-201ENST00000418645 1148 ntBASIC16.29■□□□□ 0.2
ODF4Q2M2E3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 C1QBPP2-201ENST00000528754 825 ntBASIC16.29■□□□□ 0.2
ODF4Q2M2E3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 MYC-208ENST00000641036 567 ntBASIC16.29■□□□□ 0.2
ODF4Q2M2E3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 OR6D1P-203ENST00000641209 4860 ntBASIC16.29■□□□□ 0.2
ODF4Q2M2E3 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ODF4Q2M2E3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 AC112777.1-201ENST00000540175 1423 ntBASIC16.28■□□□□ 0.2
ODF4Q2M2E3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 REXO1L9P-201ENST00000604264 2108 ntBASIC16.28■□□□□ 0.2
ODF4Q2M2E3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 AC106820.2-201ENST00000563775 3264 ntBASIC16.28■□□□□ 0.2
ODF4Q2M2E3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 AC133681.1-201ENST00000465482 601 ntBASIC16.28■□□□□ 0.2
ODF4Q2M2E3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 AC011298.2-201ENST00000617989 482 ntBASIC16.28■□□□□ 0.2
ODF4Q2M2E3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ODF4Q2M2E3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms