Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CFHR3Q02985 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.34□□□□□ -0.11
CFHR3Q02985 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CFHR3Q02985 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.34□□□□□ -0.11
CFHR3Q02985 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.34□□□□□ -0.11
CFHR3Q02985 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.34□□□□□ -0.11
CFHR3Q02985 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.34□□□□□ -0.11
CFHR3Q02985 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.34□□□□□ -0.11
CFHR3Q02985 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CFHR3Q02985 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CFHR3Q02985 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CFHR3Q02985 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.34□□□□□ -0.11
CFHR3Q02985 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CFHR3Q02985 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.34□□□□□ -0.11
CFHR3Q02985 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CFHR3Q02985 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CFHR3Q02985 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CFHR3Q02985 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.34□□□□□ -0.11
CFHR3Q02985 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CFHR3Q02985 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CFHR3Q02985 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CFHR3Q02985 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.33□□□□□ -0.11
CFHR3Q02985 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CFHR3Q02985 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
CFHR3Q02985 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CFHR3Q02985 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CFHR3Q02985 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CFHR3Q02985 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CFHR3Q02985 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CFHR3Q02985 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CFHR3Q02985 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.33□□□□□ -0.12
CFHR3Q02985 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.33□□□□□ -0.12
CFHR3Q02985 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.33□□□□□ -0.12
CFHR3Q02985 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.33□□□□□ -0.12
CFHR3Q02985 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.33□□□□□ -0.12
CFHR3Q02985 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CFHR3Q02985 AC024563.2-201ENST00000603282 481 ntBASIC14.33□□□□□ -0.12
CFHR3Q02985 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.33□□□□□ -0.12
CFHR3Q02985 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.33□□□□□ -0.12
CFHR3Q02985 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CFHR3Q02985 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CFHR3Q02985 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CFHR3Q02985 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CFHR3Q02985 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CFHR3Q02985 AC126763.1-201ENST00000552015 2118 ntBASIC14.33□□□□□ -0.12
CFHR3Q02985 AL024508.2-201ENST00000607749 1894 ntBASIC14.33□□□□□ -0.12
CFHR3Q02985 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CFHR3Q02985 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CFHR3Q02985 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CFHR3Q02985 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CFHR3Q02985 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CFHR3Q02985 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CFHR3Q02985 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CFHR3Q02985 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFHR3Q02985 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFHR3Q02985 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CFHR3Q02985 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CFHR3Q02985 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.32□□□□□ -0.12
CFHR3Q02985 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFHR3Q02985 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFHR3Q02985 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFHR3Q02985 AL138781.2-201ENST00000617896 1843 ntBASIC14.32□□□□□ -0.12
CFHR3Q02985 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CFHR3Q02985 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFHR3Q02985 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFHR3Q02985 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFHR3Q02985 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFHR3Q02985 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.32□□□□□ -0.12
CFHR3Q02985 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.32□□□□□ -0.12
CFHR3Q02985 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFHR3Q02985 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CFHR3Q02985 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.32□□□□□ -0.12
CFHR3Q02985 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CFHR3Q02985 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.32□□□□□ -0.12
CFHR3Q02985 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.32□□□□□ -0.12
CFHR3Q02985 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.32□□□□□ -0.12
CFHR3Q02985 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.32□□□□□ -0.12
CFHR3Q02985 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.32□□□□□ -0.12
CFHR3Q02985 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.32□□□□□ -0.12
CFHR3Q02985 AC011498.5-201ENST00000592027 486 ntBASIC14.32□□□□□ -0.12
CFHR3Q02985 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CFHR3Q02985 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.32□□□□□ -0.12
CFHR3Q02985 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFHR3Q02985 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFHR3Q02985 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.32□□□□□ -0.12
CFHR3Q02985 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFHR3Q02985 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.32□□□□□ -0.12
CFHR3Q02985 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CFHR3Q02985 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CFHR3Q02985 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFHR3Q02985 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFHR3Q02985 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFHR3Q02985 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.31□□□□□ -0.12
CFHR3Q02985 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFHR3Q02985 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFHR3Q02985 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFHR3Q02985 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFHR3Q02985 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CFHR3Q02985 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CFHR3Q02985 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms