Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDR2Q01850 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDR2Q01850 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDR2Q01850 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDR2Q01850 AC018470.1-201ENST00000624790 3129 ntBASIC19.6■□□□□ 0.73
CDR2Q01850 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.6■□□□□ 0.73
CDR2Q01850 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDR2Q01850 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CDR2Q01850 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDR2Q01850 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CDR2Q01850 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.6■□□□□ 0.73
CDR2Q01850 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDR2Q01850 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.6■□□□□ 0.73
CDR2Q01850 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.6■□□□□ 0.73
CDR2Q01850 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDR2Q01850 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.6■□□□□ 0.73
CDR2Q01850 AC104390.1-201ENST00000555663 520 ntBASIC19.6■□□□□ 0.73
CDR2Q01850 FAM87A-204ENST00000613235 858 ntBASIC19.6■□□□□ 0.73
CDR2Q01850 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDR2Q01850 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.6■□□□□ 0.73
CDR2Q01850 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.6■□□□□ 0.73
CDR2Q01850 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CDR2Q01850 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
CDR2Q01850 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDR2Q01850 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CDR2Q01850 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.6■□□□□ 0.73
CDR2Q01850 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.6■□□□□ 0.73
CDR2Q01850 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDR2Q01850 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CDR2Q01850 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDR2Q01850 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.59■□□□□ 0.73
CDR2Q01850 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR2Q01850 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR2Q01850 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
CDR2Q01850 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDR2Q01850 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR2Q01850 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CDR2Q01850 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.59■□□□□ 0.73
CDR2Q01850 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR2Q01850 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.59■□□□□ 0.73
CDR2Q01850 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR2Q01850 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR2Q01850 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR2Q01850 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.59■□□□□ 0.73
CDR2Q01850 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.59■□□□□ 0.73
CDR2Q01850 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDR2Q01850 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDR2Q01850 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDR2Q01850 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR2Q01850 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.59■□□□□ 0.73
CDR2Q01850 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDR2Q01850 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDR2Q01850 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDR2Q01850 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR2Q01850 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.59■□□□□ 0.73
CDR2Q01850 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR2Q01850 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR2Q01850 NOC2LP2-201ENST00000407594 1944 ntBASIC19.59■□□□□ 0.73
CDR2Q01850 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDR2Q01850 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.58■□□□□ 0.73
CDR2Q01850 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.58■□□□□ 0.73
CDR2Q01850 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDR2Q01850 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CDR2Q01850 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDR2Q01850 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDR2Q01850 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDR2Q01850 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDR2Q01850 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.58■□□□□ 0.72
CDR2Q01850 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.58■□□□□ 0.72
CDR2Q01850 ECEL1P2-202ENST00000465689 757 ntBASIC19.58■□□□□ 0.72
CDR2Q01850 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.58■□□□□ 0.72
CDR2Q01850 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDR2Q01850 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDR2Q01850 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CDR2Q01850 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.58■□□□□ 0.72
CDR2Q01850 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CDR2Q01850 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDR2Q01850 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CDR2Q01850 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.58■□□□□ 0.72
CDR2Q01850 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CDR2Q01850 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
CDR2Q01850 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDR2Q01850 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDR2Q01850 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.57■□□□□ 0.72
CDR2Q01850 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CDR2Q01850 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDR2Q01850 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CDR2Q01850 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.57■□□□□ 0.72
CDR2Q01850 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.57■□□□□ 0.72
CDR2Q01850 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDR2Q01850 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.57■□□□□ 0.72
CDR2Q01850 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.57■□□□□ 0.72
CDR2Q01850 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDR2Q01850 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.57■□□□□ 0.72
CDR2Q01850 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDR2Q01850 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.57■□□□□ 0.72
CDR2Q01850 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.57■□□□□ 0.72
CDR2Q01850 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.57■□□□□ 0.72
CDR2Q01850 MIR3180-4-201ENST00000582223 153 ntBASIC19.57■□□□□ 0.72
CDR2Q01850 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms