Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.27■□□□□ 0.67
CBX1P83916 C1R-202ENST00000536053 2347 ntTSL 2 BASIC19.26■□□□□ 0.67
CBX1P83916 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.26■□□□□ 0.67
CBX1P83916 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CBX1P83916 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX1P83916 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX1P83916 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX1P83916 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CBX1P83916 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX1P83916 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.26■□□□□ 0.67
CBX1P83916 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.26■□□□□ 0.67
CBX1P83916 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX1P83916 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC19.26■□□□□ 0.67
CBX1P83916 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.26■□□□□ 0.67
CBX1P83916 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX1P83916 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.26■□□□□ 0.67
CBX1P83916 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.26■□□□□ 0.67
CBX1P83916 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
CBX1P83916 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX1P83916 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX1P83916 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CBX1P83916 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.26■□□□□ 0.67
CBX1P83916 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.26■□□□□ 0.67
CBX1P83916 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CBX1P83916 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.26■□□□□ 0.67
CBX1P83916 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CBX1P83916 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CBX1P83916 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX1P83916 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CBX1P83916 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX1P83916 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CBX1P83916 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX1P83916 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX1P83916 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CBX1P83916 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CBX1P83916 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CBX1P83916 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CBX1P83916 KRT8P20-201ENST00000423953 1409 ntBASIC19.25■□□□□ 0.67
CBX1P83916 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CBX1P83916 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CBX1P83916 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CBX1P83916 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CBX1P83916 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CBX1P83916 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CBX1P83916 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CBX1P83916 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
CBX1P83916 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CBX1P83916 AC006116.8-202ENST00000587620 1550 ntBASIC19.25■□□□□ 0.67
CBX1P83916 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.25■□□□□ 0.67
CBX1P83916 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.25■□□□□ 0.67
CBX1P83916 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.25■□□□□ 0.67
CBX1P83916 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CBX1P83916 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CBX1P83916 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CBX1P83916 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.25■□□□□ 0.67
CBX1P83916 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CBX1P83916 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CBX1P83916 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CBX1P83916 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CBX1P83916 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.25■□□□□ 0.67
CBX1P83916 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.25■□□□□ 0.67
CBX1P83916 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CBX1P83916 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX1P83916 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX1P83916 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.24■□□□□ 0.67
CBX1P83916 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CBX1P83916 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX1P83916 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CBX1P83916 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CBX1P83916 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CBX1P83916 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.24■□□□□ 0.67
CBX1P83916 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CBX1P83916 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CBX1P83916 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.24■□□□□ 0.67
CBX1P83916 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.24■□□□□ 0.67
CBX1P83916 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX1P83916 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.24■□□□□ 0.67
CBX1P83916 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX1P83916 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CBX1P83916 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX1P83916 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX1P83916 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX1P83916 KRT16P2-201ENST00000414673 1423 ntBASIC19.24■□□□□ 0.67
CBX1P83916 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.24■□□□□ 0.67
CBX1P83916 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX1P83916 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX1P83916 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX1P83916 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CBX1P83916 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CBX1P83916 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CBX1P83916 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.23■□□□□ 0.67
CBX1P83916 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CBX1P83916 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CBX1P83916 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.23■□□□□ 0.67
CBX1P83916 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CBX1P83916 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.23■□□□□ 0.67
CBX1P83916 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.23■□□□□ 0.67
CBX1P83916 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CBX1P83916 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CBX1P83916 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms