Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN2P57739 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN2P57739 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CLDN2P57739 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN2P57739 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN2P57739 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.12■□□□□ 0.49
CLDN2P57739 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN2P57739 KRT89P-201ENST00000620027 1478 ntBASIC18.12■□□□□ 0.49
CLDN2P57739 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN2P57739 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN2P57739 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CLDN2P57739 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.12■□□□□ 0.49
CLDN2P57739 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN2P57739 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN2P57739 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN2P57739 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN2P57739 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN2P57739 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN2P57739 AC004870.1-201ENST00000315132 882 ntBASIC18.11■□□□□ 0.49
CLDN2P57739 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CLDN2P57739 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.11■□□□□ 0.49
CLDN2P57739 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.11■□□□□ 0.49
CLDN2P57739 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CLDN2P57739 EMBP1-201ENST00000458200 901 ntBASIC18.11■□□□□ 0.49
CLDN2P57739 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN2P57739 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.11■□□□□ 0.49
CLDN2P57739 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.11■□□□□ 0.49
CLDN2P57739 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.11■□□□□ 0.49
CLDN2P57739 Z69720.1-201ENST00000601483 472 ntBASIC18.11■□□□□ 0.49
CLDN2P57739 AC099336.1-202ENST00000602961 463 ntBASIC18.11■□□□□ 0.49
CLDN2P57739 AL121772.3-201ENST00000610840 674 ntBASIC18.11■□□□□ 0.49
CLDN2P57739 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CLDN2P57739 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN2P57739 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN2P57739 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN2P57739 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN2P57739 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN2P57739 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN2P57739 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN2P57739 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN2P57739 AC005082.1-201ENST00000413042 2259 ntBASIC18.11■□□□□ 0.49
CLDN2P57739 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN2P57739 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CLDN2P57739 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CLDN2P57739 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN2P57739 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN2P57739 SDHAP2-201ENST00000455183 2001 ntBASIC18.1■□□□□ 0.49
CLDN2P57739 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN2P57739 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN2P57739 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CLDN2P57739 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN2P57739 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CLDN2P57739 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN2P57739 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN2P57739 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN2P57739 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN2P57739 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN2P57739 KRT17P6-201ENST00000453795 1220 ntBASIC18.1■□□□□ 0.49
CLDN2P57739 KRT18P31-201ENST00000506277 1292 ntBASIC18.1■□□□□ 0.49
CLDN2P57739 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.1■□□□□ 0.49
CLDN2P57739 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
CLDN2P57739 AP005901.3-202ENST00000581653 237 ntBASIC18.1■□□□□ 0.49
CLDN2P57739 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLDN2P57739 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.1■□□□□ 0.49
CLDN2P57739 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.1■□□□□ 0.49
CLDN2P57739 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.1■□□□□ 0.49
CLDN2P57739 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN2P57739 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN2P57739 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN2P57739 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CLDN2P57739 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN2P57739 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CLDN2P57739 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN2P57739 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.09■□□□□ 0.49
CLDN2P57739 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN2P57739 AC112777.1-201ENST00000540175 1423 ntBASIC18.09■□□□□ 0.49
CLDN2P57739 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN2P57739 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.09■□□□□ 0.49
CLDN2P57739 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN2P57739 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN2P57739 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDN2P57739 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CLDN2P57739 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN2P57739 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms