Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
WNT3AP56704 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
WNT3AP56704 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
WNT3AP56704 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.59■□□□□ 0.57
WNT3AP56704 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
WNT3AP56704 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
WNT3AP56704 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
WNT3AP56704 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.58■□□□□ 0.57
WNT3AP56704 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
WNT3AP56704 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
WNT3AP56704 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
WNT3AP56704 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.58■□□□□ 0.57
WNT3AP56704 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.58■□□□□ 0.57
WNT3AP56704 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
WNT3AP56704 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
WNT3AP56704 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
WNT3AP56704 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
WNT3AP56704 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.58■□□□□ 0.56
WNT3AP56704 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.58■□□□□ 0.56
WNT3AP56704 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.58■□□□□ 0.56
WNT3AP56704 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.58■□□□□ 0.56
WNT3AP56704 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
WNT3AP56704 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
WNT3AP56704 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.58■□□□□ 0.56
WNT3AP56704 LINC01023-201ENST00000606054 436 ntBASIC18.58■□□□□ 0.56
WNT3AP56704 AL023973.1-201ENST00000624619 620 ntBASIC18.58■□□□□ 0.56
WNT3AP56704 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
WNT3AP56704 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
WNT3AP56704 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
WNT3AP56704 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
WNT3AP56704 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.58■□□□□ 0.56
WNT3AP56704 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
WNT3AP56704 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
WNT3AP56704 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
WNT3AP56704 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
WNT3AP56704 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3AP56704 AC073508.3-201ENST00000619697 1419 ntBASIC18.57■□□□□ 0.56
WNT3AP56704 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.57■□□□□ 0.56
WNT3AP56704 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3AP56704 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3AP56704 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3AP56704 AC007613.1-201ENST00000572811 2597 ntBASIC18.57■□□□□ 0.56
WNT3AP56704 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3AP56704 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3AP56704 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3AP56704 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.57■□□□□ 0.56
WNT3AP56704 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.57■□□□□ 0.56
WNT3AP56704 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3AP56704 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.57■□□□□ 0.56
WNT3AP56704 AC005521.1-201ENST00000393351 872 ntBASIC18.57■□□□□ 0.56
WNT3AP56704 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3AP56704 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.57■□□□□ 0.56
WNT3AP56704 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.57■□□□□ 0.56
WNT3AP56704 GCSHP2-201ENST00000560971 527 ntBASIC18.57■□□□□ 0.56
WNT3AP56704 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.57■□□□□ 0.56
WNT3AP56704 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3AP56704 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
WNT3AP56704 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
WNT3AP56704 AC092865.7-201ENST00000641832 219 ntBASIC18.57■□□□□ 0.56
WNT3AP56704 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3AP56704 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3AP56704 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3AP56704 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.57■□□□□ 0.56
WNT3AP56704 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.57■□□□□ 0.56
WNT3AP56704 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.57■□□□□ 0.56
WNT3AP56704 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
WNT3AP56704 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3AP56704 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3AP56704 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3AP56704 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
WNT3AP56704 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
WNT3AP56704 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.56■□□□□ 0.56
WNT3AP56704 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
WNT3AP56704 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
WNT3AP56704 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
WNT3AP56704 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
WNT3AP56704 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
WNT3AP56704 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
WNT3AP56704 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.56■□□□□ 0.56
WNT3AP56704 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.56■□□□□ 0.56
WNT3AP56704 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.56■□□□□ 0.56
WNT3AP56704 MIR3917-201ENST00000580971 93 ntBASIC18.56■□□□□ 0.56
WNT3AP56704 AC140113.3-201ENST00000605663 199 ntBASIC18.56■□□□□ 0.56
WNT3AP56704 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
WNT3AP56704 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
WNT3AP56704 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
WNT3AP56704 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
WNT3AP56704 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.56■□□□□ 0.56
WNT3AP56704 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.56■□□□□ 0.56
WNT3AP56704 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
WNT3AP56704 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
WNT3AP56704 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
WNT3AP56704 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
WNT3AP56704 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
WNT3AP56704 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.55■□□□□ 0.56
WNT3AP56704 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.55■□□□□ 0.56
WNT3AP56704 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.55■□□□□ 0.56
WNT3AP56704 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.55■□□□□ 0.56
WNT3AP56704 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.55■□□□□ 0.56
WNT3AP56704 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms