Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH4P55283 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH4P55283 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH4P55283 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH4P55283 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH4P55283 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CDH4P55283 IGHGP-201ENST00000390555 1178 ntBASIC18.75■□□□□ 0.59
CDH4P55283 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH4P55283 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH4P55283 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.75■□□□□ 0.59
CDH4P55283 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH4P55283 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH4P55283 RNF126P1-202ENST00000569893 925 ntBASIC18.75■□□□□ 0.59
CDH4P55283 AC005332.3-201ENST00000589904 676 ntBASIC18.75■□□□□ 0.59
CDH4P55283 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CDH4P55283 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CDH4P55283 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDH4P55283 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH4P55283 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH4P55283 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH4P55283 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CDH4P55283 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 LINC01126-201ENST00000623515 1646 ntBASIC18.74■□□□□ 0.59
CDH4P55283 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDH4P55283 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH4P55283 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH4P55283 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH4P55283 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH4P55283 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 UPK3BP1-201ENST00000428678 509 ntBASIC18.74■□□□□ 0.59
CDH4P55283 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.74■□□□□ 0.59
CDH4P55283 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 AC113404.2-201ENST00000507884 177 ntBASIC18.74■□□□□ 0.59
CDH4P55283 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.74■□□□□ 0.59
CDH4P55283 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.74■□□□□ 0.59
CDH4P55283 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH4P55283 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDH4P55283 GPR32P1-201ENST00000601788 811 ntBASIC18.74■□□□□ 0.59
CDH4P55283 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CDH4P55283 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.74■□□□□ 0.59
CDH4P55283 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 Z83836.1-201ENST00000624605 1642 ntBASIC18.74■□□□□ 0.59
CDH4P55283 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH4P55283 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH4P55283 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH4P55283 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CDH4P55283 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH4P55283 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH4P55283 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH4P55283 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH4P55283 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH4P55283 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH4P55283 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
CDH4P55283 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH4P55283 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH4P55283 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH4P55283 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH4P55283 TSPY22P-201ENST00000427496 604 ntBASIC18.73■□□□□ 0.59
CDH4P55283 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.73■□□□□ 0.59
CDH4P55283 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH4P55283 KRT8P26-201ENST00000534154 1276 ntBASIC18.73■□□□□ 0.59
CDH4P55283 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH4P55283 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms