Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN5P54829 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN5P54829 VENTXP7-201ENST00000475503 772 ntBASIC18.95■□□□□ 0.62
PTPN5P54829 HLA-J-203ENST00000494367 1087 ntBASIC18.95■□□□□ 0.62
PTPN5P54829 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.95■□□□□ 0.62
PTPN5P54829 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPN5P54829 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN5P54829 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPN5P54829 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN5P54829 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
PTPN5P54829 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN5P54829 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN5P54829 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN5P54829 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN5P54829 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PTPN5P54829 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PTPN5P54829 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PTPN5P54829 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PTPN5P54829 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN5P54829 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PTPN5P54829 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN5P54829 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PTPN5P54829 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.94■□□□□ 0.62
PTPN5P54829 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PTPN5P54829 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PTPN5P54829 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.94■□□□□ 0.62
PTPN5P54829 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PTPN5P54829 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN5P54829 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN5P54829 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN5P54829 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN5P54829 AC092364.2-202ENST00000597012 1073 ntBASIC18.94■□□□□ 0.62
PTPN5P54829 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN5P54829 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN5P54829 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN5P54829 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN5P54829 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN5P54829 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN5P54829 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN5P54829 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN5P54829 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN5P54829 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN5P54829 AL161938.1-201ENST00000569833 2180 ntBASIC18.93■□□□□ 0.62
PTPN5P54829 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN5P54829 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PTPN5P54829 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN5P54829 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PTPN5P54829 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN5P54829 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.93■□□□□ 0.62
PTPN5P54829 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN5P54829 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN5P54829 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.93■□□□□ 0.62
PTPN5P54829 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.93■□□□□ 0.62
PTPN5P54829 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PTPN5P54829 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.93■□□□□ 0.62
PTPN5P54829 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN5P54829 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN5P54829 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.93■□□□□ 0.62
PTPN5P54829 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
PTPN5P54829 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN5P54829 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PTPN5P54829 MIR7706-201ENST00000613747 67 ntBASIC18.93■□□□□ 0.62
PTPN5P54829 AL157888.1-201ENST00000631930 593 ntBASIC18.93■□□□□ 0.62
PTPN5P54829 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN5P54829 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.93■□□□□ 0.62
PTPN5P54829 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PTPN5P54829 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN5P54829 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.93■□□□□ 0.62
PTPN5P54829 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN5P54829 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN5P54829 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN5P54829 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN5P54829 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN5P54829 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.93■□□□□ 0.62
PTPN5P54829 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN5P54829 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PTPN5P54829 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PTPN5P54829 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN5P54829 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
PTPN5P54829 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms