Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.55■□□□□ 0.56
LIMK2P53671 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.55■□□□□ 0.56
LIMK2P53671 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.55■□□□□ 0.56
LIMK2P53671 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LIMK2P53671 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LIMK2P53671 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
LIMK2P53671 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
LIMK2P53671 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LIMK2P53671 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.55■□□□□ 0.56
LIMK2P53671 AC008764.6-201ENST00000595909 2069 ntBASIC18.54■□□□□ 0.56
LIMK2P53671 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LIMK2P53671 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LIMK2P53671 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LIMK2P53671 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.54■□□□□ 0.56
LIMK2P53671 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.54■□□□□ 0.56
LIMK2P53671 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.54■□□□□ 0.56
LIMK2P53671 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LIMK2P53671 AK4P3-201ENST00000418260 669 ntBASIC18.54■□□□□ 0.56
LIMK2P53671 WWOX-216ENST00000569818 525 ntBASIC18.54■□□□□ 0.56
LIMK2P53671 AC092338.2-201ENST00000568827 1415 ntBASIC18.54■□□□□ 0.56
LIMK2P53671 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LIMK2P53671 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LIMK2P53671 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LIMK2P53671 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LIMK2P53671 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LIMK2P53671 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LIMK2P53671 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LIMK2P53671 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LIMK2P53671 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LIMK2P53671 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LIMK2P53671 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LIMK2P53671 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.53■□□□□ 0.56
LIMK2P53671 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LIMK2P53671 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
LIMK2P53671 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LIMK2P53671 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LIMK2P53671 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LIMK2P53671 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LIMK2P53671 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LIMK2P53671 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LIMK2P53671 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.53■□□□□ 0.56
LIMK2P53671 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.53■□□□□ 0.56
LIMK2P53671 TSPY17P-201ENST00000450329 467 ntBASIC18.53■□□□□ 0.56
LIMK2P53671 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.53■□□□□ 0.56
LIMK2P53671 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
LIMK2P53671 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
LIMK2P53671 AL023803.3-201ENST00000615559 522 ntBASIC18.53■□□□□ 0.56
LIMK2P53671 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LIMK2P53671 AL138966.2-201ENST00000621997 464 ntBASIC18.53■□□□□ 0.56
LIMK2P53671 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LIMK2P53671 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LIMK2P53671 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LIMK2P53671 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.53■□□□□ 0.56
LIMK2P53671 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.53■□□□□ 0.56
LIMK2P53671 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LIMK2P53671 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LIMK2P53671 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LIMK2P53671 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LIMK2P53671 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.52■□□□□ 0.56
LIMK2P53671 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.52■□□□□ 0.56
LIMK2P53671 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LIMK2P53671 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LIMK2P53671 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.52■□□□□ 0.56
LIMK2P53671 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LIMK2P53671 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LIMK2P53671 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.52■□□□□ 0.56
LIMK2P53671 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LIMK2P53671 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LIMK2P53671 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LIMK2P53671 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.52■□□□□ 0.56
LIMK2P53671 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LIMK2P53671 CA15P1-201ENST00000481698 905 ntBASIC18.52■□□□□ 0.56
LIMK2P53671 AC087388.1-201ENST00000571370 1112 ntBASIC18.52■□□□□ 0.56
LIMK2P53671 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.52■□□□□ 0.56
LIMK2P53671 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LIMK2P53671 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LIMK2P53671 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.52■□□□□ 0.56
LIMK2P53671 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LIMK2P53671 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LIMK2P53671 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LIMK2P53671 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.52■□□□□ 0.56
LIMK2P53671 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LIMK2P53671 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
LIMK2P53671 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
LIMK2P53671 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
LIMK2P53671 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.52■□□□□ 0.55
LIMK2P53671 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LIMK2P53671 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LIMK2P53671 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.52■□□□□ 0.55
LIMK2P53671 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LIMK2P53671 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LIMK2P53671 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LIMK2P53671 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LIMK2P53671 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LIMK2P53671 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LIMK2P53671 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LIMK2P53671 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.51■□□□□ 0.55
LIMK2P53671 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LIMK2P53671 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LIMK2P53671 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms