Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGA2P52926 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGA2P52926 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGA2P52926 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.79■□□□□ 0.28
HMGA2P52926 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.79■□□□□ 0.28
HMGA2P52926 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.79■□□□□ 0.28
HMGA2P52926 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 RARRES2P10-201ENST00000564312 460 ntBASIC16.79■□□□□ 0.28
HMGA2P52926 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.79■□□□□ 0.28
HMGA2P52926 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HMGA2P52926 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.79■□□□□ 0.28
HMGA2P52926 AC036111.1-201ENST00000533973 1582 ntBASIC16.79■□□□□ 0.28
HMGA2P52926 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HMGA2P52926 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.79■□□□□ 0.28
HMGA2P52926 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.79■□□□□ 0.28
HMGA2P52926 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HMGA2P52926 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
HMGA2P52926 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGA2P52926 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HMGA2P52926 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGA2P52926 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGA2P52926 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGA2P52926 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGA2P52926 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGA2P52926 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.78■□□□□ 0.28
HMGA2P52926 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.78■□□□□ 0.28
HMGA2P52926 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGA2P52926 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGA2P52926 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGA2P52926 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGA2P52926 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGA2P52926 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGA2P52926 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.78■□□□□ 0.28
HMGA2P52926 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HMGA2P52926 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.78■□□□□ 0.28
HMGA2P52926 CA15P1-201ENST00000481698 905 ntBASIC16.78■□□□□ 0.28
HMGA2P52926 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.78■□□□□ 0.28
HMGA2P52926 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.78■□□□□ 0.28
HMGA2P52926 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGA2P52926 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGA2P52926 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGA2P52926 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGA2P52926 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGA2P52926 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.78■□□□□ 0.28
HMGA2P52926 PP12613-201ENST00000424958 2230 ntBASIC16.78■□□□□ 0.28
HMGA2P52926 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGA2P52926 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGA2P52926 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGA2P52926 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGA2P52926 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGA2P52926 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGA2P52926 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGA2P52926 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGA2P52926 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGA2P52926 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HMGA2P52926 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HMGA2P52926 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMGA2P52926 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGA2P52926 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
HMGA2P52926 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.77■□□□□ 0.28
HMGA2P52926 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGA2P52926 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.77■□□□□ 0.28
HMGA2P52926 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGA2P52926 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGA2P52926 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGA2P52926 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMGA2P52926 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.77■□□□□ 0.28
HMGA2P52926 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGA2P52926 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGA2P52926 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMGA2P52926 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.77■□□□□ 0.28
HMGA2P52926 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.77■□□□□ 0.28
HMGA2P52926 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.77■□□□□ 0.28
HMGA2P52926 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.77■□□□□ 0.28
HMGA2P52926 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.77■□□□□ 0.28
HMGA2P52926 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
HMGA2P52926 AC073648.6-201ENST00000641589 218 ntBASIC16.77■□□□□ 0.28
HMGA2P52926 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HMGA2P52926 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGA2P52926 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGA2P52926 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.77■□□□□ 0.28
HMGA2P52926 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.77■□□□□ 0.28
HMGA2P52926 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.77■□□□□ 0.27
HMGA2P52926 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
HMGA2P52926 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMGA2P52926 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HMGA2P52926 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HMGA2P52926 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
HMGA2P52926 HOXB1-202ENST00000577092 1414 ntBASIC16.77■□□□□ 0.27
HMGA2P52926 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms