Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF144AP50876 CCR12P-201ENST00000446203 998 ntBASIC17.09■□□□□ 0.33
RNF144AP50876 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF144AP50876 CA15P1-201ENST00000481698 905 ntBASIC17.09■□□□□ 0.33
RNF144AP50876 MIR3180-5-201ENST00000583743 153 ntBASIC17.09■□□□□ 0.33
RNF144AP50876 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF144AP50876 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF144AP50876 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RNF144AP50876 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF144AP50876 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF144AP50876 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF144AP50876 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RNF144AP50876 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RNF144AP50876 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RNF144AP50876 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF144AP50876 AL133373.2-201ENST00000623187 2828 ntBASIC17.08■□□□□ 0.33
RNF144AP50876 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
RNF144AP50876 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RNF144AP50876 NOC2LP1-202ENST00000452600 2235 ntBASIC17.08■□□□□ 0.33
RNF144AP50876 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
RNF144AP50876 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.08■□□□□ 0.33
RNF144AP50876 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.08■□□□□ 0.33
RNF144AP50876 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RNF144AP50876 NOC2LP2-201ENST00000407594 1944 ntBASIC17.08■□□□□ 0.33
RNF144AP50876 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.08■□□□□ 0.33
RNF144AP50876 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF144AP50876 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF144AP50876 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RNF144AP50876 LINC01568-207ENST00000641790 1380 ntBASIC17.08■□□□□ 0.32
RNF144AP50876 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF144AP50876 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF144AP50876 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.08■□□□□ 0.32
RNF144AP50876 TSPY17P-201ENST00000450329 467 ntBASIC17.08■□□□□ 0.32
RNF144AP50876 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.08■□□□□ 0.32
RNF144AP50876 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF144AP50876 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF144AP50876 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF144AP50876 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF144AP50876 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF144AP50876 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
RNF144AP50876 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RNF144AP50876 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF144AP50876 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF144AP50876 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF144AP50876 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF144AP50876 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF144AP50876 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF144AP50876 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF144AP50876 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RNF144AP50876 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 TSPY14P-201ENST00000303979 915 ntBASIC17.07■□□□□ 0.32
RNF144AP50876 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
RNF144AP50876 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.07■□□□□ 0.32
RNF144AP50876 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF144AP50876 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF144AP50876 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 FAM87A-204ENST00000613235 858 ntBASIC17.07■□□□□ 0.32
RNF144AP50876 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RNF144AP50876 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF144AP50876 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF144AP50876 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.07■□□□□ 0.32
RNF144AP50876 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF144AP50876 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF144AP50876 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF144AP50876 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF144AP50876 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RNF144AP50876 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF144AP50876 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF144AP50876 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF144AP50876 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF144AP50876 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms