Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC1A6P48664 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.1■□□□□ 0.49
SLC1A6P48664 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC1A6P48664 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A6P48664 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A6P48664 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC1A6P48664 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC1A6P48664 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A6P48664 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SLC1A6P48664 AC233263.1-201ENST00000578059 224 ntBASIC18.1■□□□□ 0.49
SLC1A6P48664 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SLC1A6P48664 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A6P48664 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC1A6P48664 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A6P48664 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
SLC1A6P48664 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A6P48664 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A6P48664 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC1A6P48664 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A6P48664 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A6P48664 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A6P48664 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SLC1A6P48664 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A6P48664 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A6P48664 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A6P48664 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC1A6P48664 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SLC1A6P48664 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A6P48664 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC1A6P48664 AC239809.2-201ENST00000415381 517 ntBASIC18.09■□□□□ 0.49
SLC1A6P48664 AC004951.3-201ENST00000418645 1148 ntBASIC18.09■□□□□ 0.49
SLC1A6P48664 NIFKP9-201ENST00000419265 221 ntBASIC18.09■□□□□ 0.49
SLC1A6P48664 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A6P48664 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC1A6P48664 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC1A6P48664 AC142086.2-201ENST00000569753 217 ntBASIC18.09■□□□□ 0.49
SLC1A6P48664 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC1A6P48664 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A6P48664 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC1A6P48664 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A6P48664 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A6P48664 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A6P48664 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A6P48664 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A6P48664 PHGDH-209ENST00000641074 1780 ntBASIC18.09■□□□□ 0.49
SLC1A6P48664 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SLC1A6P48664 AC009053.2-201ENST00000563701 2365 ntBASIC18.09■□□□□ 0.49
SLC1A6P48664 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SLC1A6P48664 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SLC1A6P48664 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC1A6P48664 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC1A6P48664 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SLC1A6P48664 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC1A6P48664 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC1A6P48664 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.08■□□□□ 0.49
SLC1A6P48664 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A6P48664 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A6P48664 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A6P48664 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A6P48664 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SLC1A6P48664 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A6P48664 AP000593.1-201ENST00000393668 712 ntBASIC18.08■□□□□ 0.48
SLC1A6P48664 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.08■□□□□ 0.48
SLC1A6P48664 AP003097.1-201ENST00000530657 1135 ntBASIC18.08■□□□□ 0.48
SLC1A6P48664 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.08■□□□□ 0.48
SLC1A6P48664 CKBP1-201ENST00000565489 1086 ntBASIC18.08■□□□□ 0.48
SLC1A6P48664 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.08■□□□□ 0.48
SLC1A6P48664 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
SLC1A6P48664 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A6P48664 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A6P48664 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A6P48664 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A6P48664 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC1A6P48664 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A6P48664 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A6P48664 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A6P48664 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A6P48664 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SLC1A6P48664 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
SLC1A6P48664 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A6P48664 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A6P48664 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC1A6P48664 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC1A6P48664 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC1A6P48664 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC1A6P48664 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC1A6P48664 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC1A6P48664 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC1A6P48664 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC1A6P48664 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC1A6P48664 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC1A6P48664 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
SLC1A6P48664 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC1A6P48664 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SLC1A6P48664 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC1A6P48664 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC1A6P48664 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC1A6P48664 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC1A6P48664 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SLC1A6P48664 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms