Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP13P45452 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
MMP13P45452 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP13P45452 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.12■□□□□ 0.65
MMP13P45452 AL023284.2-201ENST00000405850 579 ntBASIC19.12■□□□□ 0.65
MMP13P45452 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP13P45452 AC007663.1-201ENST00000438948 1240 ntBASIC19.12■□□□□ 0.65
MMP13P45452 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.12■□□□□ 0.65
MMP13P45452 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP13P45452 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.12■□□□□ 0.65
MMP13P45452 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.12■□□□□ 0.65
MMP13P45452 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.12■□□□□ 0.65
MMP13P45452 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP13P45452 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP13P45452 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MMP13P45452 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.12■□□□□ 0.65
MMP13P45452 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MMP13P45452 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.11■□□□□ 0.65
MMP13P45452 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.11■□□□□ 0.65
MMP13P45452 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP13P45452 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.11■□□□□ 0.65
MMP13P45452 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.11■□□□□ 0.65
MMP13P45452 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.11■□□□□ 0.65
MMP13P45452 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.11■□□□□ 0.65
MMP13P45452 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP13P45452 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.11■□□□□ 0.65
MMP13P45452 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.11■□□□□ 0.65
MMP13P45452 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MMP13P45452 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP13P45452 LINC01568-207ENST00000641790 1380 ntBASIC19.11■□□□□ 0.65
MMP13P45452 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP13P45452 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.11■□□□□ 0.65
MMP13P45452 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.11■□□□□ 0.65
MMP13P45452 MCCD1P1-208ENST00000445732 328 ntBASIC19.11■□□□□ 0.65
MMP13P45452 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.11■□□□□ 0.65
MMP13P45452 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
MMP13P45452 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.11■□□□□ 0.65
MMP13P45452 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.11■□□□□ 0.65
MMP13P45452 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
MMP13P45452 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
MMP13P45452 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP13P45452 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP13P45452 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.11■□□□□ 0.65
MMP13P45452 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.11■□□□□ 0.65
MMP13P45452 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP13P45452 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
MMP13P45452 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.1■□□□□ 0.65
MMP13P45452 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP13P45452 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP13P45452 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.1■□□□□ 0.65
MMP13P45452 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP13P45452 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP13P45452 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP13P45452 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
MMP13P45452 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
MMP13P45452 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
MMP13P45452 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MMP13P45452 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
MMP13P45452 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
MMP13P45452 INGX-201ENST00000359239 846 ntBASIC19.1■□□□□ 0.65
MMP13P45452 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.1■□□□□ 0.65
MMP13P45452 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.1■□□□□ 0.65
MMP13P45452 MIR4674-201ENST00000582457 87 ntBASIC19.1■□□□□ 0.65
MMP13P45452 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.1■□□□□ 0.65
MMP13P45452 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MMP13P45452 AC010653.2-201ENST00000623505 997 ntBASIC19.1■□□□□ 0.65
MMP13P45452 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP13P45452 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP13P45452 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.1■□□□□ 0.65
MMP13P45452 AL109659.2-201ENST00000606809 1674 ntBASIC19.1■□□□□ 0.65
MMP13P45452 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP13P45452 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP13P45452 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP13P45452 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP13P45452 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MMP13P45452 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP13P45452 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP13P45452 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.1■□□□□ 0.65
MMP13P45452 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
MMP13P45452 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MMP13P45452 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
MMP13P45452 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP13P45452 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP13P45452 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
MMP13P45452 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP13P45452 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.09■□□□□ 0.65
MMP13P45452 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MMP13P45452 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP13P45452 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP13P45452 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.09■□□□□ 0.65
MMP13P45452 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
MMP13P45452 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.09■□□□□ 0.65
MMP13P45452 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.09■□□□□ 0.65
MMP13P45452 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP13P45452 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP13P45452 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
MMP13P45452 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.09■□□□□ 0.65
MMP13P45452 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.09■□□□□ 0.65
MMP13P45452 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
MMP13P45452 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms