Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC009102.3-201ENST00000623118 1491 ntBASIC18.56■□□□□ 0.56
CHRNA4P43681 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA4P43681 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA4P43681 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA4P43681 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA4P43681 AC093677.2-201ENST00000600169 1863 ntBASIC18.56■□□□□ 0.56
CHRNA4P43681 AC073508.3-201ENST00000619697 1419 ntBASIC18.56■□□□□ 0.56
CHRNA4P43681 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNA4P43681 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA4P43681 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA4P43681 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNA4P43681 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA4P43681 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNA4P43681 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CHRNA4P43681 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNA4P43681 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNA4P43681 MIR149-201ENST00000384879 89 ntBASIC18.55■□□□□ 0.56
CHRNA4P43681 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CHRNA4P43681 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 AL137013.1-201ENST00000432946 1228 ntBASIC18.55■□□□□ 0.56
CHRNA4P43681 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNA4P43681 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNA4P43681 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNA4P43681 GCSHP2-201ENST00000560971 527 ntBASIC18.55■□□□□ 0.56
CHRNA4P43681 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CHRNA4P43681 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CHRNA4P43681 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
CHRNA4P43681 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CHRNA4P43681 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNA4P43681 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNA4P43681 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.55■□□□□ 0.56
CHRNA4P43681 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNA4P43681 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNA4P43681 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CHRNA4P43681 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.55■□□□□ 0.56
CHRNA4P43681 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.54■□□□□ 0.56
CHRNA4P43681 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.54■□□□□ 0.56
CHRNA4P43681 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.54■□□□□ 0.56
CHRNA4P43681 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CHRNA4P43681 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.54■□□□□ 0.56
CHRNA4P43681 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.54■□□□□ 0.56
CHRNA4P43681 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.54■□□□□ 0.56
CHRNA4P43681 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CHRNA4P43681 LINC01023-201ENST00000606054 436 ntBASIC18.54■□□□□ 0.56
CHRNA4P43681 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 ABALON-201ENST00000629058 1903 ntBASIC18.54■□□□□ 0.56
CHRNA4P43681 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CHRNA4P43681 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.54■□□□□ 0.56
CHRNA4P43681 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CHRNA4P43681 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.54■□□□□ 0.56
CHRNA4P43681 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.54■□□□□ 0.56
CHRNA4P43681 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CHRNA4P43681 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA4P43681 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.53■□□□□ 0.56
CHRNA4P43681 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.53■□□□□ 0.56
CHRNA4P43681 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.53■□□□□ 0.56
CHRNA4P43681 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CHRNA4P43681 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.53■□□□□ 0.56
CHRNA4P43681 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CHRNA4P43681 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms