Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SSR1P43307 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR1P43307 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSR1P43307 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.56■□□□□ 0.72
SSR1P43307 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR1P43307 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR1P43307 AC073592.3-201ENST00000625118 1834 ntBASIC19.56■□□□□ 0.72
SSR1P43307 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR1P43307 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.56■□□□□ 0.72
SSR1P43307 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSR1P43307 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR1P43307 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.56■□□□□ 0.72
SSR1P43307 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.56■□□□□ 0.72
SSR1P43307 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.56■□□□□ 0.72
SSR1P43307 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSR1P43307 AC116562.2-201ENST00000507042 360 ntBASIC19.56■□□□□ 0.72
SSR1P43307 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.56■□□□□ 0.72
SSR1P43307 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.56■□□□□ 0.72
SSR1P43307 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.56■□□□□ 0.72
SSR1P43307 Z99916.2-201ENST00000604037 246 ntBASIC19.56■□□□□ 0.72
SSR1P43307 DGCR10-201ENST00000609839 495 ntBASIC19.56■□□□□ 0.72
SSR1P43307 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR1P43307 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR1P43307 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.56■□□□□ 0.72
SSR1P43307 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SSR1P43307 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.56■□□□□ 0.72
SSR1P43307 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR1P43307 AC008556.1-201ENST00000610908 2040 ntBASIC19.56■□□□□ 0.72
SSR1P43307 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR1P43307 OR6D1P-203ENST00000641209 4860 ntBASIC19.56■□□□□ 0.72
SSR1P43307 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SSR1P43307 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SSR1P43307 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.55■□□□□ 0.72
SSR1P43307 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.55■□□□□ 0.72
SSR1P43307 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.55■□□□□ 0.72
SSR1P43307 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.55■□□□□ 0.72
SSR1P43307 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.55■□□□□ 0.72
SSR1P43307 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.55■□□□□ 0.72
SSR1P43307 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.55■□□□□ 0.72
SSR1P43307 AC026471.5-201ENST00000615068 467 ntBASIC19.55■□□□□ 0.72
SSR1P43307 REXO1L10P-201ENST00000615707 1290 ntBASIC19.55■□□□□ 0.72
SSR1P43307 AC008622.2-201ENST00000617006 1229 ntBASIC19.55■□□□□ 0.72
SSR1P43307 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 REXO1L12P-201ENST00000622156 912 ntBASIC19.55■□□□□ 0.72
SSR1P43307 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.55■□□□□ 0.72
SSR1P43307 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.55■□□□□ 0.72
SSR1P43307 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SSR1P43307 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSR1P43307 BICD1-207ENST00000551848 1962 ntBASIC19.54■□□□□ 0.72
SSR1P43307 AC112777.1-201ENST00000540175 1423 ntBASIC19.54■□□□□ 0.72
SSR1P43307 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSR1P43307 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSR1P43307 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSR1P43307 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.54■□□□□ 0.72
SSR1P43307 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.54■□□□□ 0.72
SSR1P43307 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.54■□□□□ 0.72
SSR1P43307 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.54■□□□□ 0.72
SSR1P43307 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.54■□□□□ 0.72
SSR1P43307 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSR1P43307 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSR1P43307 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.54■□□□□ 0.72
SSR1P43307 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSR1P43307 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
SSR1P43307 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.54■□□□□ 0.72
SSR1P43307 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSR1P43307 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSR1P43307 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSR1P43307 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SSR1P43307 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SSR1P43307 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR1P43307 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.53■□□□□ 0.72
SSR1P43307 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR1P43307 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.53■□□□□ 0.72
SSR1P43307 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SSR1P43307 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SSR1P43307 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR1P43307 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SSR1P43307 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR1P43307 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR1P43307 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SSR1P43307 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms