Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HTTP42858 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HTTP42858 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTTP42858 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTTP42858 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTTP42858 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTTP42858 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.59■□□□□ 0.89
HTTP42858 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.59■□□□□ 0.89
HTTP42858 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HTTP42858 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.59■□□□□ 0.89
HTTP42858 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTTP42858 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTTP42858 IRX1P1-201ENST00000438849 1838 ntBASIC20.59■□□□□ 0.89
HTTP42858 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTTP42858 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
HTTP42858 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTTP42858 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.59■□□□□ 0.89
HTTP42858 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.59■□□□□ 0.89
HTTP42858 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.59■□□□□ 0.89
HTTP42858 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.59■□□□□ 0.89
HTTP42858 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.59■□□□□ 0.89
HTTP42858 AC073621.1-201ENST00000392730 636 ntBASIC20.59■□□□□ 0.89
HTTP42858 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.59■□□□□ 0.89
HTTP42858 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTTP42858 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HTTP42858 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
HTTP42858 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HTTP42858 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
HTTP42858 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.58■□□□□ 0.89
HTTP42858 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.58■□□□□ 0.89
HTTP42858 AC005082.1-201ENST00000413042 2259 ntBASIC20.58■□□□□ 0.89
HTTP42858 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HTTP42858 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.58■□□□□ 0.89
HTTP42858 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.58■□□□□ 0.88
HTTP42858 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.58■□□□□ 0.88
HTTP42858 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.58■□□□□ 0.88
HTTP42858 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.58■□□□□ 0.88
HTTP42858 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.58■□□□□ 0.88
HTTP42858 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.58■□□□□ 0.88
HTTP42858 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HTTP42858 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HTTP42858 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
HTTP42858 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.58■□□□□ 0.88
HTTP42858 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HTTP42858 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HTTP42858 AC108751.1-201ENST00000490852 363 ntBASIC20.58■□□□□ 0.88
HTTP42858 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.58■□□□□ 0.88
HTTP42858 C20orf181-201ENST00000623918 480 ntBASIC20.58■□□□□ 0.88
HTTP42858 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.58■□□□□ 0.88
HTTP42858 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HTTP42858 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.57■□□□□ 0.88
HTTP42858 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTTP42858 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.57■□□□□ 0.88
HTTP42858 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.57■□□□□ 0.88
HTTP42858 AC105339.3-201ENST00000560043 636 ntBASIC20.57■□□□□ 0.88
HTTP42858 SNHG9-202ENST00000564014 471 ntBASIC20.57■□□□□ 0.88
HTTP42858 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HTTP42858 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTTP42858 MTMR9LP-203ENST00000426597 1545 ntBASIC20.57■□□□□ 0.88
HTTP42858 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTTP42858 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTTP42858 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.57■□□□□ 0.88
HTTP42858 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HTTP42858 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTTP42858 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.57■□□□□ 0.88
HTTP42858 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.57■□□□□ 0.88
HTTP42858 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.57■□□□□ 0.88
HTTP42858 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HTTP42858 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTTP42858 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTTP42858 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTTP42858 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.57■□□□□ 0.88
HTTP42858 HEIH-201ENST00000623091 1652 ntBASIC20.57■□□□□ 0.88
HTTP42858 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.56■□□□□ 0.88
HTTP42858 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.56■□□□□ 0.88
HTTP42858 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTTP42858 AC005498.2-205ENST00000593218 784 ntBASIC20.56■□□□□ 0.88
HTTP42858 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.56■□□□□ 0.88
HTTP42858 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTTP42858 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HTTP42858 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.56■□□□□ 0.88
HTTP42858 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HTTP42858 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTTP42858 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.56■□□□□ 0.88
HTTP42858 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTTP42858 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
HTTP42858 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.56■□□□□ 0.88
HTTP42858 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.56■□□□□ 0.88
HTTP42858 AC138761.1-201ENST00000584393 385 ntBASIC20.56■□□□□ 0.88
HTTP42858 AC073592.4-201ENST00000623827 446 ntBASIC20.56■□□□□ 0.88
HTTP42858 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HTTP42858 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTTP42858 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTTP42858 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
HTTP42858 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTTP42858 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTTP42858 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTTP42858 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.56■□□□□ 0.88
HTTP42858 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.56■□□□□ 0.88
HTTP42858 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms