Protein–RNA interactions for Protein: P42766

RPL35, 60S ribosomal protein L35, humanhuman

Known RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35P42766 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RPL35P42766 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RPL35P42766 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.86□□□□□ -0.03
RPL35P42766 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL35P42766 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.85□□□□□ -0.03
RPL35P42766 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL35P42766 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL35P42766 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RPL35P42766 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RPL35P42766 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPL35P42766 PHGDH-210ENST00000641115 1638 ntBASIC14.85□□□□□ -0.03
RPL35P42766 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
RPL35P42766 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
RPL35P42766 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL35P42766 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL35P42766 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL35P42766 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPL35P42766 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.85□□□□□ -0.03
RPL35P42766 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RPL35P42766 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC14.85□□□□□ -0.03
RPL35P42766 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RPL35P42766 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL35P42766 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL35P42766 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.85□□□□□ -0.03
RPL35P42766 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPL35P42766 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL35P42766 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RPL35P42766 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL35P42766 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.85□□□□□ -0.03
RPL35P42766 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL35P42766 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
RPL35P42766 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPL35P42766 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.85□□□□□ -0.03
RPL35P42766 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL35P42766 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPL35P42766 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPL35P42766 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPL35P42766 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.84□□□□□ -0.03
RPL35P42766 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPL35P42766 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL35P42766 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL35P42766 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.84□□□□□ -0.03
RPL35P42766 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.84□□□□□ -0.03
RPL35P42766 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL35P42766 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPL35P42766 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL35P42766 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL35P42766 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL35P42766 MTURN-203ENST00000409688 843 ntTSL 2 BASIC14.84□□□□□ -0.03
RPL35P42766 AL356441.2-201ENST00000443009 864 ntBASIC14.84□□□□□ -0.03
RPL35P42766 AP001160.3-201ENST00000601484 763 ntBASIC14.84□□□□□ -0.03
RPL35P42766 AL354811.1-201ENST00000610286 706 ntBASIC14.84□□□□□ -0.03
RPL35P42766 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL35P42766 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL35P42766 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.84□□□□□ -0.03
RPL35P42766 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RPL35P42766 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL35P42766 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RPL35P42766 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPL35P42766 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL35P42766 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL35P42766 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL35P42766 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL35P42766 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL35P42766 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RPL35P42766 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPL35P42766 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
RPL35P42766 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPL35P42766 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPL35P42766 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPL35P42766 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.83□□□□□ -0.03
RPL35P42766 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPL35P42766 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPL35P42766 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPL35P42766 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL35P42766 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.83□□□□□ -0.04
RPL35P42766 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL35P42766 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RPL35P42766 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL35P42766 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPL35P42766 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPL35P42766 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RPL35P42766 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RPL35P42766 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RPL35P42766 AL136116.3-201ENST00000402907 1138 ntBASIC14.83□□□□□ -0.04
RPL35P42766 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPL35P42766 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.83□□□□□ -0.04
RPL35P42766 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.83□□□□□ -0.04
RPL35P42766 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPL35P42766 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.83□□□□□ -0.04
RPL35P42766 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.83□□□□□ -0.04
RPL35P42766 AL512353.2-201ENST00000448759 1962 ntBASIC14.83□□□□□ -0.04
RPL35P42766 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RPL35P42766 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.83□□□□□ -0.04
RPL35P42766 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RPL35P42766 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
RPL35P42766 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms