Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.38■□□□□ 0.69
RFC1P35251 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.38■□□□□ 0.69
RFC1P35251 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.38■□□□□ 0.69
RFC1P35251 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.38■□□□□ 0.69
RFC1P35251 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFC1P35251 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC1P35251 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.38■□□□□ 0.69
RFC1P35251 AL163051.1-201ENST00000569214 1512 ntBASIC19.38■□□□□ 0.69
RFC1P35251 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.38■□□□□ 0.69
RFC1P35251 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RFC1P35251 AC112497.1-201ENST00000624824 639 ntBASIC19.38■□□□□ 0.69
RFC1P35251 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.38■□□□□ 0.69
RFC1P35251 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.38■□□□□ 0.69
RFC1P35251 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.38■□□□□ 0.69
RFC1P35251 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC1P35251 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC1P35251 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC1P35251 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RFC1P35251 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.37■□□□□ 0.69
RFC1P35251 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC1P35251 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFC1P35251 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC1P35251 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RFC1P35251 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFC1P35251 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RFC1P35251 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.37■□□□□ 0.69
RFC1P35251 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC1P35251 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.37■□□□□ 0.69
RFC1P35251 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC1P35251 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.37■□□□□ 0.69
RFC1P35251 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC1P35251 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.37■□□□□ 0.69
RFC1P35251 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFC1P35251 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.37■□□□□ 0.69
RFC1P35251 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RFC1P35251 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC1P35251 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC1P35251 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RFC1P35251 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFC1P35251 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
RFC1P35251 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC1P35251 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RFC1P35251 AC009947.2-201ENST00000444014 672 ntBASIC19.37■□□□□ 0.69
RFC1P35251 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.37■□□□□ 0.69
RFC1P35251 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RFC1P35251 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.37■□□□□ 0.69
RFC1P35251 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.37■□□□□ 0.69
RFC1P35251 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC1P35251 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC1P35251 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RFC1P35251 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFC1P35251 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.36■□□□□ 0.69
RFC1P35251 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFC1P35251 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.36■□□□□ 0.69
RFC1P35251 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC1P35251 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC1P35251 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC1P35251 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.36■□□□□ 0.69
RFC1P35251 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC1P35251 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC1P35251 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC1P35251 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RFC1P35251 AC073912.3-201ENST00000624414 853 ntBASIC19.36■□□□□ 0.69
RFC1P35251 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RFC1P35251 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.36■□□□□ 0.69
RFC1P35251 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFC1P35251 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC1P35251 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC1P35251 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RFC1P35251 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.36■□□□□ 0.69
RFC1P35251 AL162741.1-201ENST00000565563 1558 ntBASIC19.36■□□□□ 0.69
RFC1P35251 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RFC1P35251 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.35■□□□□ 0.69
RFC1P35251 SDHAP2-201ENST00000455183 2001 ntBASIC19.35■□□□□ 0.69
RFC1P35251 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFC1P35251 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC1P35251 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFC1P35251 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC1P35251 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC1P35251 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.35■□□□□ 0.69
RFC1P35251 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC1P35251 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
RFC1P35251 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC1P35251 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC1P35251 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.35■□□□□ 0.69
RFC1P35251 AC104390.1-201ENST00000555663 520 ntBASIC19.35■□□□□ 0.69
RFC1P35251 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.35■□□□□ 0.69
RFC1P35251 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.35■□□□□ 0.69
RFC1P35251 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.35■□□□□ 0.69
RFC1P35251 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RFC1P35251 AC012306.2-201ENST00000609350 630 ntBASIC19.35■□□□□ 0.69
RFC1P35251 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC1P35251 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC1P35251 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RFC1P35251 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.35■□□□□ 0.69
RFC1P35251 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.35■□□□□ 0.69
RFC1P35251 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.35■□□□□ 0.69
RFC1P35251 ABALON-201ENST00000629058 1903 ntBASIC19.35■□□□□ 0.69
RFC1P35251 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.35■□□□□ 0.69
RFC1P35251 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms