Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.6■□□□□ 0.57
RPA3P35244 AC112777.1-201ENST00000540175 1423 ntBASIC18.6■□□□□ 0.57
RPA3P35244 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RPA3P35244 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPA3P35244 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.6■□□□□ 0.57
RPA3P35244 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPA3P35244 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.6■□□□□ 0.57
RPA3P35244 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.6■□□□□ 0.57
RPA3P35244 AL355355.2-201ENST00000442321 338 ntBASIC18.6■□□□□ 0.57
RPA3P35244 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.6■□□□□ 0.57
RPA3P35244 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.6■□□□□ 0.57
RPA3P35244 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RPA3P35244 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.6■□□□□ 0.57
RPA3P35244 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.6■□□□□ 0.57
RPA3P35244 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPA3P35244 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.6■□□□□ 0.57
RPA3P35244 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.6■□□□□ 0.57
RPA3P35244 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPA3P35244 AC099398.1-201ENST00000567919 2776 ntBASIC18.6■□□□□ 0.57
RPA3P35244 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPA3P35244 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPA3P35244 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPA3P35244 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPA3P35244 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.6■□□□□ 0.57
RPA3P35244 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RPA3P35244 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPA3P35244 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPA3P35244 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPA3P35244 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPA3P35244 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPA3P35244 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPA3P35244 KRT8P45-201ENST00000414328 1447 ntBASIC18.59■□□□□ 0.57
RPA3P35244 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.59■□□□□ 0.57
RPA3P35244 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.59■□□□□ 0.57
RPA3P35244 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPA3P35244 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.59■□□□□ 0.57
RPA3P35244 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RPA3P35244 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPA3P35244 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPA3P35244 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPA3P35244 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RPA3P35244 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RPA3P35244 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.59■□□□□ 0.57
RPA3P35244 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPA3P35244 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.59■□□□□ 0.57
RPA3P35244 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.59■□□□□ 0.57
RPA3P35244 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.59■□□□□ 0.57
RPA3P35244 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPA3P35244 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.59■□□□□ 0.57
RPA3P35244 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPA3P35244 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPA3P35244 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RPA3P35244 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPA3P35244 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPA3P35244 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RPA3P35244 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPA3P35244 AC009053.2-201ENST00000563701 2365 ntBASIC18.59■□□□□ 0.57
RPA3P35244 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RPA3P35244 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RPA3P35244 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.58■□□□□ 0.57
RPA3P35244 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.58■□□□□ 0.57
RPA3P35244 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RPA3P35244 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPA3P35244 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPA3P35244 AC008556.1-201ENST00000610908 2040 ntBASIC18.58■□□□□ 0.56
RPA3P35244 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPA3P35244 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RPA3P35244 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPA3P35244 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPA3P35244 SNORA78-201ENST00000459373 127 ntBASIC18.58■□□□□ 0.56
RPA3P35244 Z85996.1-201ENST00000494644 937 ntBASIC18.58■□□□□ 0.56
RPA3P35244 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.58■□□□□ 0.56
RPA3P35244 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.58■□□□□ 0.56
RPA3P35244 AC026471.5-201ENST00000615068 467 ntBASIC18.58■□□□□ 0.56
RPA3P35244 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.58■□□□□ 0.56
RPA3P35244 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPA3P35244 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPA3P35244 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RPA3P35244 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPA3P35244 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPA3P35244 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RPA3P35244 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPA3P35244 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPA3P35244 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.58■□□□□ 0.56
RPA3P35244 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPA3P35244 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RPA3P35244 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPA3P35244 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.57■□□□□ 0.56
RPA3P35244 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPA3P35244 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RPA3P35244 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.57■□□□□ 0.56
RPA3P35244 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPA3P35244 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPA3P35244 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.57■□□□□ 0.56
RPA3P35244 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.57■□□□□ 0.56
RPA3P35244 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RPA3P35244 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RPA3P35244 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
RPA3P35244 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RPA3P35244 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms