Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.91■□□□□ 0.46
EPHA3P29320 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
EPHA3P29320 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EPHA3P29320 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EPHA3P29320 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
EPHA3P29320 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
EPHA3P29320 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
EPHA3P29320 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.91■□□□□ 0.46
EPHA3P29320 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EPHA3P29320 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.91■□□□□ 0.46
EPHA3P29320 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EPHA3P29320 AC012317.2-201ENST00000623305 2251 ntBASIC17.91■□□□□ 0.46
EPHA3P29320 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EPHA3P29320 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EPHA3P29320 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.9■□□□□ 0.46
EPHA3P29320 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA3P29320 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.9■□□□□ 0.46
EPHA3P29320 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA3P29320 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA3P29320 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.9■□□□□ 0.46
EPHA3P29320 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA3P29320 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.9■□□□□ 0.46
EPHA3P29320 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.9■□□□□ 0.46
EPHA3P29320 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA3P29320 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA3P29320 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA3P29320 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA3P29320 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.9■□□□□ 0.46
EPHA3P29320 AC004951.3-201ENST00000418645 1148 ntBASIC17.9■□□□□ 0.46
EPHA3P29320 AC026366.1-201ENST00000488803 879 ntBASIC17.9■□□□□ 0.46
EPHA3P29320 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.9■□□□□ 0.46
EPHA3P29320 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.9■□□□□ 0.46
EPHA3P29320 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.9■□□□□ 0.46
EPHA3P29320 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.9■□□□□ 0.46
EPHA3P29320 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.9■□□□□ 0.46
EPHA3P29320 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA3P29320 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA3P29320 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA3P29320 AL645608.8-201ENST00000606034 2086 ntBASIC17.9■□□□□ 0.46
EPHA3P29320 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.9■□□□□ 0.46
EPHA3P29320 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
EPHA3P29320 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.9■□□□□ 0.46
EPHA3P29320 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.9■□□□□ 0.46
EPHA3P29320 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA3P29320 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA3P29320 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
EPHA3P29320 AL109659.2-201ENST00000606809 1674 ntBASIC17.9■□□□□ 0.46
EPHA3P29320 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
EPHA3P29320 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
EPHA3P29320 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
EPHA3P29320 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.89■□□□□ 0.46
EPHA3P29320 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
EPHA3P29320 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
EPHA3P29320 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA3P29320 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA3P29320 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA3P29320 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA3P29320 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.89■□□□□ 0.45
EPHA3P29320 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
EPHA3P29320 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.89■□□□□ 0.45
EPHA3P29320 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.89■□□□□ 0.45
EPHA3P29320 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
EPHA3P29320 RPS2P4-201ENST00000476944 856 ntBASIC17.89■□□□□ 0.45
EPHA3P29320 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.89■□□□□ 0.45
EPHA3P29320 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
EPHA3P29320 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.89■□□□□ 0.45
EPHA3P29320 CKBP1-201ENST00000565489 1086 ntBASIC17.89■□□□□ 0.45
EPHA3P29320 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.89■□□□□ 0.45
EPHA3P29320 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.89■□□□□ 0.45
EPHA3P29320 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
EPHA3P29320 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA3P29320 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
EPHA3P29320 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA3P29320 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.89■□□□□ 0.45
EPHA3P29320 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA3P29320 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA3P29320 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.89■□□□□ 0.45
EPHA3P29320 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA3P29320 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
EPHA3P29320 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA3P29320 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.88■□□□□ 0.45
EPHA3P29320 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA3P29320 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA3P29320 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA3P29320 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA3P29320 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA3P29320 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA3P29320 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
EPHA3P29320 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA3P29320 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA3P29320 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.88■□□□□ 0.45
EPHA3P29320 RNA5SP413-201ENST00000516373 109 ntBASIC17.88■□□□□ 0.45
EPHA3P29320 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.88■□□□□ 0.45
EPHA3P29320 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.88■□□□□ 0.45
EPHA3P29320 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA3P29320 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
EPHA3P29320 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA3P29320 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA3P29320 PHGDH-209ENST00000641074 1780 ntBASIC17.88■□□□□ 0.45
EPHA3P29320 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms