Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN3P26045 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN3P26045 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN3P26045 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN3P26045 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN3P26045 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.75■□□□□ 0.59
PTPN3P26045 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN3P26045 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN3P26045 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PTPN3P26045 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN3P26045 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN3P26045 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN3P26045 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN3P26045 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.75■□□□□ 0.59
PTPN3P26045 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN3P26045 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.75■□□□□ 0.59
PTPN3P26045 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN3P26045 NEK4P2-201ENST00000580004 1012 ntBASIC18.75■□□□□ 0.59
PTPN3P26045 MIR3180-4-201ENST00000582223 153 ntBASIC18.75■□□□□ 0.59
PTPN3P26045 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN3P26045 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN3P26045 AC073912.3-201ENST00000624414 853 ntBASIC18.75■□□□□ 0.59
PTPN3P26045 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN3P26045 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN3P26045 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN3P26045 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PTPN3P26045 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PTPN3P26045 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN3P26045 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN3P26045 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.75■□□□□ 0.59
PTPN3P26045 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN3P26045 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN3P26045 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN3P26045 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.75■□□□□ 0.59
PTPN3P26045 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN3P26045 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN3P26045 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PTPN3P26045 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
PTPN3P26045 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN3P26045 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN3P26045 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN3P26045 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN3P26045 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN3P26045 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN3P26045 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN3P26045 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPN3P26045 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN3P26045 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.74■□□□□ 0.59
PTPN3P26045 SLC25A3P1-201ENST00000443844 931 ntBASIC18.74■□□□□ 0.59
PTPN3P26045 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN3P26045 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.74■□□□□ 0.59
PTPN3P26045 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN3P26045 AC012306.2-201ENST00000609350 630 ntBASIC18.74■□□□□ 0.59
PTPN3P26045 AL138966.2-201ENST00000621997 464 ntBASIC18.74■□□□□ 0.59
PTPN3P26045 AC133561.5-201ENST00000635547 218 ntBASIC18.74■□□□□ 0.59
PTPN3P26045 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PTPN3P26045 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PTPN3P26045 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN3P26045 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN3P26045 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.74■□□□□ 0.59
PTPN3P26045 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN3P26045 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PTPN3P26045 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN3P26045 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PTPN3P26045 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.73■□□□□ 0.59
PTPN3P26045 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN3P26045 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.73■□□□□ 0.59
PTPN3P26045 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN3P26045 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PTPN3P26045 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.73■□□□□ 0.59
PTPN3P26045 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PTPN3P26045 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.73■□□□□ 0.59
PTPN3P26045 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
PTPN3P26045 AC141257.4-201ENST00000634557 245 ntBASIC18.73■□□□□ 0.59
PTPN3P26045 AC136944.6-201ENST00000634818 245 ntBASIC18.73■□□□□ 0.59
PTPN3P26045 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PTPN3P26045 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN3P26045 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
PTPN3P26045 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
PTPN3P26045 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN3P26045 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN3P26045 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN3P26045 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN3P26045 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN3P26045 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PTPN3P26045 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN3P26045 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.73■□□□□ 0.59
PTPN3P26045 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN3P26045 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN3P26045 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN3P26045 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
PTPN3P26045 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN3P26045 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PTPN3P26045 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN3P26045 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms