Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 AL049637.2-201ENST00000641778 930 ntBASIC18.53■□□□□ 0.56
CCND1P24385 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCND1P24385 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.53■□□□□ 0.56
CCND1P24385 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.53■□□□□ 0.56
CCND1P24385 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCND1P24385 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.53■□□□□ 0.56
CCND1P24385 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCND1P24385 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCND1P24385 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CCND1P24385 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCND1P24385 FSCN1P1-201ENST00000568912 1481 ntBASIC18.52■□□□□ 0.56
CCND1P24385 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.52■□□□□ 0.56
CCND1P24385 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCND1P24385 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCND1P24385 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CCND1P24385 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCND1P24385 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCND1P24385 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CCND1P24385 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCND1P24385 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCND1P24385 RCC2P6-201ENST00000526625 1557 ntBASIC18.52■□□□□ 0.56
CCND1P24385 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCND1P24385 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.52■□□□□ 0.56
CCND1P24385 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCND1P24385 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCND1P24385 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.52■□□□□ 0.56
CCND1P24385 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCND1P24385 FAM197Y1-201ENST00000421178 764 ntBASIC18.52■□□□□ 0.56
CCND1P24385 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCND1P24385 AC008550.1-201ENST00000511500 884 ntBASIC18.52■□□□□ 0.56
CCND1P24385 PRSS44-201ENST00000515154 1146 ntBASIC18.52■□□□□ 0.56
CCND1P24385 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.52■□□□□ 0.56
CCND1P24385 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.52■□□□□ 0.56
CCND1P24385 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCND1P24385 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCND1P24385 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCND1P24385 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCND1P24385 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCND1P24385 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCND1P24385 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCND1P24385 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CCND1P24385 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCND1P24385 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCND1P24385 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.51■□□□□ 0.55
CCND1P24385 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
CCND1P24385 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCND1P24385 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCND1P24385 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.51■□□□□ 0.55
CCND1P24385 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCND1P24385 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCND1P24385 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCND1P24385 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CCND1P24385 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCND1P24385 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.51■□□□□ 0.55
CCND1P24385 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.51■□□□□ 0.55
CCND1P24385 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.51■□□□□ 0.55
CCND1P24385 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCND1P24385 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCND1P24385 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCND1P24385 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CCND1P24385 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCND1P24385 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCND1P24385 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCND1P24385 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCND1P24385 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCND1P24385 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.5■□□□□ 0.55
CCND1P24385 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCND1P24385 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCND1P24385 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCND1P24385 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CCND1P24385 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCND1P24385 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.5■□□□□ 0.55
CCND1P24385 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCND1P24385 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCND1P24385 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCND1P24385 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.5■□□□□ 0.55
CCND1P24385 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.5■□□□□ 0.55
CCND1P24385 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.5■□□□□ 0.55
CCND1P24385 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.5■□□□□ 0.55
CCND1P24385 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.5■□□□□ 0.55
CCND1P24385 AC113410.3-201ENST00000623366 203 ntBASIC18.5■□□□□ 0.55
CCND1P24385 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCND1P24385 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCND1P24385 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCND1P24385 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.5■□□□□ 0.55
CCND1P24385 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCND1P24385 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCND1P24385 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCND1P24385 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.5■□□□□ 0.55
CCND1P24385 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCND1P24385 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCND1P24385 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCND1P24385 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCND1P24385 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCND1P24385 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCND1P24385 FEM1AP3-201ENST00000403722 1741 ntBASIC18.49■□□□□ 0.55
CCND1P24385 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CCND1P24385 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCND1P24385 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCND1P24385 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms