Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 SPDYE13P-201ENST00000445314 798 ntBASIC17.46■□□□□ 0.39
MMP11P24347 AC092597.1-201ENST00000487352 616 ntBASIC17.46■□□□□ 0.39
MMP11P24347 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.46■□□□□ 0.39
MMP11P24347 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.46■□□□□ 0.39
MMP11P24347 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.46■□□□□ 0.39
MMP11P24347 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
MMP11P24347 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.46■□□□□ 0.39
MMP11P24347 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.46■□□□□ 0.39
MMP11P24347 AC093458.2-201ENST00000623150 629 ntBASIC17.46■□□□□ 0.39
MMP11P24347 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP11P24347 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
MMP11P24347 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP11P24347 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP11P24347 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MMP11P24347 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.46■□□□□ 0.39
MMP11P24347 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MMP11P24347 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.46■□□□□ 0.39
MMP11P24347 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
MMP11P24347 HOXB1-202ENST00000577092 1414 ntBASIC17.46■□□□□ 0.39
MMP11P24347 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
MMP11P24347 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
MMP11P24347 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
MMP11P24347 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
MMP11P24347 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP11P24347 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP11P24347 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MMP11P24347 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP11P24347 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP11P24347 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP11P24347 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP11P24347 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP11P24347 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP11P24347 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
MMP11P24347 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
MMP11P24347 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP11P24347 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP11P24347 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MMP11P24347 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
MMP11P24347 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
MMP11P24347 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.45■□□□□ 0.38
MMP11P24347 MIR3917-201ENST00000580971 93 ntBASIC17.45■□□□□ 0.38
MMP11P24347 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.45■□□□□ 0.38
MMP11P24347 AC026471.1-201ENST00000564629 3026 ntBASIC17.45■□□□□ 0.38
MMP11P24347 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
MMP11P24347 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
MMP11P24347 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
MMP11P24347 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MMP11P24347 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP11P24347 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
MMP11P24347 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
MMP11P24347 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.44■□□□□ 0.38
MMP11P24347 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.44■□□□□ 0.38
MMP11P24347 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
MMP11P24347 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
MMP11P24347 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP11P24347 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.44■□□□□ 0.38
MMP11P24347 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP11P24347 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP11P24347 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP11P24347 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP11P24347 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MMP11P24347 MIR564-202ENST00000385049 94 ntBASIC17.44■□□□□ 0.38
MMP11P24347 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.44■□□□□ 0.38
MMP11P24347 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MMP11P24347 AL645929.1-201ENST00000420084 975 ntBASIC17.44■□□□□ 0.38
MMP11P24347 KRT18P23-201ENST00000435622 1283 ntBASIC17.44■□□□□ 0.38
MMP11P24347 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP11P24347 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
MMP11P24347 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.44■□□□□ 0.38
MMP11P24347 KRT18P56-201ENST00000507275 550 ntBASIC17.44■□□□□ 0.38
MMP11P24347 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MMP11P24347 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.44■□□□□ 0.38
MMP11P24347 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP11P24347 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MMP11P24347 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.44■□□□□ 0.38
MMP11P24347 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP11P24347 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
MMP11P24347 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
MMP11P24347 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP11P24347 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP11P24347 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
MMP11P24347 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP11P24347 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.43■□□□□ 0.38
MMP11P24347 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP11P24347 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP11P24347 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP11P24347 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MMP11P24347 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP11P24347 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP11P24347 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.43■□□□□ 0.38
MMP11P24347 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.43■□□□□ 0.38
MMP11P24347 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MMP11P24347 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.43■□□□□ 0.38
MMP11P24347 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.43■□□□□ 0.38
MMP11P24347 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP11P24347 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.43■□□□□ 0.38
MMP11P24347 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MMP11P24347 AL157888.1-201ENST00000631930 593 ntBASIC17.43■□□□□ 0.38
MMP11P24347 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP11P24347 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms