Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
KCNA3P22001 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC22.46■■□□□ 1.19
KCNA3P22001 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KCNA3P22001 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KCNA3P22001 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KCNA3P22001 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
KCNA3P22001 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
KCNA3P22001 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
KCNA3P22001 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.46■■□□□ 1.19
KCNA3P22001 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
KCNA3P22001 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.45■■□□□ 1.18
KCNA3P22001 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.45■■□□□ 1.18
KCNA3P22001 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
KCNA3P22001 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
KCNA3P22001 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
KCNA3P22001 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
KCNA3P22001 AL035633.1-201ENST00000406139 838 ntBASIC22.45■■□□□ 1.18
KCNA3P22001 PON3-203ENST00000427422 894 ntTSL 3 BASIC22.45■■□□□ 1.18
KCNA3P22001 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC22.45■■□□□ 1.18
KCNA3P22001 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC22.45■■□□□ 1.18
KCNA3P22001 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC22.45■■□□□ 1.18
KCNA3P22001 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC22.45■■□□□ 1.18
KCNA3P22001 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC22.45■■□□□ 1.18
KCNA3P22001 MTMR9LP-203ENST00000426597 1545 ntBASIC22.45■■□□□ 1.18
KCNA3P22001 UROS-202ENST00000368778 1556 ntTSL 2 BASIC22.45■■□□□ 1.18
KCNA3P22001 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC22.45■■□□□ 1.18
KCNA3P22001 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
KCNA3P22001 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
KCNA3P22001 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.45■■□□□ 1.18
KCNA3P22001 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
KCNA3P22001 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
KCNA3P22001 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
KCNA3P22001 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
KCNA3P22001 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
KCNA3P22001 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
KCNA3P22001 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
KCNA3P22001 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
KCNA3P22001 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
KCNA3P22001 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC22.44■■□□□ 1.18
KCNA3P22001 MIR149-201ENST00000384879 89 ntBASIC22.44■■□□□ 1.18
KCNA3P22001 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
KCNA3P22001 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
KCNA3P22001 LAGE3P1-201ENST00000425356 484 ntBASIC22.44■■□□□ 1.18
KCNA3P22001 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
KCNA3P22001 KRT18P27-201ENST00000427733 1299 ntBASIC22.44■■□□□ 1.18
KCNA3P22001 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.44■■□□□ 1.18
KCNA3P22001 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC22.44■■□□□ 1.18
KCNA3P22001 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
KCNA3P22001 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
KCNA3P22001 MIR4469-201ENST00000583919 79 ntBASIC22.44■■□□□ 1.18
KCNA3P22001 AC092364.2-202ENST00000597012 1073 ntBASIC22.44■■□□□ 1.18
KCNA3P22001 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC22.44■■□□□ 1.18
KCNA3P22001 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
KCNA3P22001 HEIH-201ENST00000623091 1652 ntBASIC22.44■■□□□ 1.18
KCNA3P22001 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
KCNA3P22001 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
KCNA3P22001 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
KCNA3P22001 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
KCNA3P22001 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
KCNA3P22001 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
KCNA3P22001 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
KCNA3P22001 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
KCNA3P22001 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
KCNA3P22001 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
KCNA3P22001 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
KCNA3P22001 AC254562.1-201ENST00000417586 456 ntBASIC22.43■■□□□ 1.18
KCNA3P22001 AL645939.2-201ENST00000427340 991 ntBASIC22.43■■□□□ 1.18
KCNA3P22001 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
KCNA3P22001 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC22.43■■□□□ 1.18
KCNA3P22001 ALG1L5P-201ENST00000482043 771 ntBASIC22.43■■□□□ 1.18
KCNA3P22001 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
KCNA3P22001 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC22.43■■□□□ 1.18
KCNA3P22001 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC22.43■■□□□ 1.18
KCNA3P22001 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
KCNA3P22001 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC22.43■■□□□ 1.18
KCNA3P22001 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.43■■□□□ 1.18
KCNA3P22001 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
KCNA3P22001 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
KCNA3P22001 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC22.42■■□□□ 1.18
KCNA3P22001 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
KCNA3P22001 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
KCNA3P22001 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC22.42■■□□□ 1.18
KCNA3P22001 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC22.42■■□□□ 1.18
KCNA3P22001 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.42■■□□□ 1.18
KCNA3P22001 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
KCNA3P22001 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC22.42■■□□□ 1.18
KCNA3P22001 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC22.42■■□□□ 1.18
KCNA3P22001 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.42■■□□□ 1.18
KCNA3P22001 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.42■■□□□ 1.18
KCNA3P22001 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
KCNA3P22001 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
KCNA3P22001 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC22.42■■□□□ 1.18
KCNA3P22001 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
KCNA3P22001 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
KCNA3P22001 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
KCNA3P22001 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
KCNA3P22001 AC073621.1-201ENST00000392730 636 ntBASIC22.42■■□□□ 1.18
KCNA3P22001 CTNS-203ENST00000399306 803 ntTSL 3 BASIC22.42■■□□□ 1.18
KCNA3P22001 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC22.42■■□□□ 1.18
KCNA3P22001 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms