Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
XRCC1P18887 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
XRCC1P18887 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
XRCC1P18887 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.35■□□□□ 0.53
XRCC1P18887 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
XRCC1P18887 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.35■□□□□ 0.53
XRCC1P18887 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
XRCC1P18887 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
XRCC1P18887 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
XRCC1P18887 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC1P18887 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.34■□□□□ 0.53
XRCC1P18887 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.34■□□□□ 0.53
XRCC1P18887 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
XRCC1P18887 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC1P18887 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC1P18887 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC1P18887 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC1P18887 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
XRCC1P18887 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.34■□□□□ 0.53
XRCC1P18887 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.34■□□□□ 0.53
XRCC1P18887 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC1P18887 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
XRCC1P18887 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
XRCC1P18887 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
XRCC1P18887 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC1P18887 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC1P18887 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.34■□□□□ 0.53
XRCC1P18887 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.34■□□□□ 0.53
XRCC1P18887 AC009947.2-201ENST00000444014 672 ntBASIC18.34■□□□□ 0.53
XRCC1P18887 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.34■□□□□ 0.53
XRCC1P18887 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.34■□□□□ 0.53
XRCC1P18887 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC1P18887 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC1P18887 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.34■□□□□ 0.53
XRCC1P18887 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
XRCC1P18887 IRX1P1-201ENST00000438849 1838 ntBASIC18.34■□□□□ 0.53
XRCC1P18887 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC1P18887 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC1P18887 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC1P18887 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC1P18887 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC1P18887 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
XRCC1P18887 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
XRCC1P18887 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
XRCC1P18887 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.33■□□□□ 0.53
XRCC1P18887 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
XRCC1P18887 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.33■□□□□ 0.53
XRCC1P18887 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
XRCC1P18887 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
XRCC1P18887 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
XRCC1P18887 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
XRCC1P18887 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XRCC1P18887 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XRCC1P18887 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XRCC1P18887 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.33■□□□□ 0.52
XRCC1P18887 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XRCC1P18887 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
XRCC1P18887 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.33■□□□□ 0.52
XRCC1P18887 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XRCC1P18887 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
XRCC1P18887 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.33■□□□□ 0.52
XRCC1P18887 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.33■□□□□ 0.52
XRCC1P18887 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
XRCC1P18887 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.33■□□□□ 0.52
XRCC1P18887 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
XRCC1P18887 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XRCC1P18887 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XRCC1P18887 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.33■□□□□ 0.52
XRCC1P18887 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
XRCC1P18887 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XRCC1P18887 AIRN-201ENST00000601203 4374 ntBASIC18.33■□□□□ 0.52
XRCC1P18887 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XRCC1P18887 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
XRCC1P18887 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XRCC1P18887 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XRCC1P18887 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.33■□□□□ 0.52
XRCC1P18887 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
XRCC1P18887 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.33■□□□□ 0.52
XRCC1P18887 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.33■□□□□ 0.52
XRCC1P18887 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
XRCC1P18887 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
XRCC1P18887 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
XRCC1P18887 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
XRCC1P18887 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.32■□□□□ 0.52
XRCC1P18887 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
XRCC1P18887 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
XRCC1P18887 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
XRCC1P18887 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
XRCC1P18887 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
XRCC1P18887 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
XRCC1P18887 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
XRCC1P18887 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.32■□□□□ 0.52
XRCC1P18887 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.32■□□□□ 0.52
XRCC1P18887 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.32■□□□□ 0.52
XRCC1P18887 MCCD1P1-208ENST00000445732 328 ntBASIC18.32■□□□□ 0.52
XRCC1P18887 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.32■□□□□ 0.52
XRCC1P18887 HOMER2P1-201ENST00000455653 964 ntBASIC18.32■□□□□ 0.52
XRCC1P18887 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.32■□□□□ 0.52
XRCC1P18887 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.32■□□□□ 0.52
XRCC1P18887 AL441883.1-201ENST00000566170 1045 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms