Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNYL3P0C7X3 AL049812.1-201ENST00000432563 2267 ntBASIC17.75■□□□□ 0.43
CCNYL3P0C7X3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNYL3P0C7X3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNYL3P0C7X3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.75■□□□□ 0.43
CCNYL3P0C7X3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNYL3P0C7X3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.75■□□□□ 0.43
CCNYL3P0C7X3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNYL3P0C7X3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNYL3P0C7X3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNYL3P0C7X3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.75■□□□□ 0.43
CCNYL3P0C7X3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCNYL3P0C7X3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 HTR7P1-202ENST00000624664 4411 ntBASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 AL645929.1-201ENST00000420084 975 ntBASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 AC112497.1-201ENST00000624824 639 ntBASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
CCNYL3P0C7X3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 NIFKP4-201ENST00000567275 1192 ntBASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCNYL3P0C7X3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CCNYL3P0C7X3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms