Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.93■□□□□ 0.3
THBS1P07996 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
THBS1P07996 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
THBS1P07996 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.93■□□□□ 0.3
THBS1P07996 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
THBS1P07996 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
THBS1P07996 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
THBS1P07996 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
THBS1P07996 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.92■□□□□ 0.3
THBS1P07996 AC008764.6-201ENST00000595909 2069 ntBASIC16.92■□□□□ 0.3
THBS1P07996 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
THBS1P07996 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
THBS1P07996 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
THBS1P07996 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.92■□□□□ 0.3
THBS1P07996 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
THBS1P07996 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
THBS1P07996 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 RCN1P1-201ENST00000400413 996 ntBASIC16.92■□□□□ 0.3
THBS1P07996 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.92■□□□□ 0.3
THBS1P07996 AC128688.1-201ENST00000487626 519 ntBASIC16.92■□□□□ 0.3
THBS1P07996 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.92■□□□□ 0.3
THBS1P07996 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 AC104390.1-201ENST00000555663 520 ntBASIC16.92■□□□□ 0.3
THBS1P07996 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 AC112497.1-201ENST00000624824 639 ntBASIC16.92■□□□□ 0.3
THBS1P07996 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.92■□□□□ 0.3
THBS1P07996 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
THBS1P07996 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.92■□□□□ 0.3
THBS1P07996 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
THBS1P07996 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
THBS1P07996 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.92■□□□□ 0.3
THBS1P07996 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
THBS1P07996 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.91■□□□□ 0.3
THBS1P07996 REXO1L9P-201ENST00000604264 2108 ntBASIC16.91■□□□□ 0.3
THBS1P07996 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.91■□□□□ 0.3
THBS1P07996 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.91■□□□□ 0.3
THBS1P07996 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.91■□□□□ 0.3
THBS1P07996 AC018470.1-201ENST00000624790 3129 ntBASIC16.91■□□□□ 0.3
THBS1P07996 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.91■□□□□ 0.3
THBS1P07996 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
THBS1P07996 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.91■□□□□ 0.3
THBS1P07996 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.91■□□□□ 0.3
THBS1P07996 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.91■□□□□ 0.3
THBS1P07996 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.91■□□□□ 0.3
THBS1P07996 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.91■□□□□ 0.3
THBS1P07996 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 PHGDH-209ENST00000641074 1780 ntBASIC16.91■□□□□ 0.3
THBS1P07996 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 AC068880.1-201ENST00000507289 2297 ntBASIC16.91■□□□□ 0.3
THBS1P07996 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.91■□□□□ 0.3
THBS1P07996 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.91■□□□□ 0.3
THBS1P07996 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.91■□□□□ 0.3
THBS1P07996 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.91■□□□□ 0.3
THBS1P07996 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
THBS1P07996 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
THBS1P07996 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.9■□□□□ 0.3
THBS1P07996 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.9■□□□□ 0.3
THBS1P07996 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
THBS1P07996 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
THBS1P07996 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
THBS1P07996 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.9■□□□□ 0.3
THBS1P07996 AL096828.2-201ENST00000567259 1965 ntBASIC16.9■□□□□ 0.3
THBS1P07996 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms