Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CTSBP07858 CHCHD2P8-201ENST00000429873 447 ntBASIC17.39■□□□□ 0.37
CTSBP07858 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.39■□□□□ 0.37
CTSBP07858 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTSBP07858 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.39■□□□□ 0.37
CTSBP07858 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.39■□□□□ 0.37
CTSBP07858 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.39■□□□□ 0.37
CTSBP07858 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTSBP07858 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CTSBP07858 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.39■□□□□ 0.37
CTSBP07858 KRT18P1-202ENST00000452408 1331 ntBASIC17.39■□□□□ 0.37
CTSBP07858 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CTSBP07858 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.39■□□□□ 0.37
CTSBP07858 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.39■□□□□ 0.37
CTSBP07858 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTSBP07858 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTSBP07858 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.38■□□□□ 0.37
CTSBP07858 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTSBP07858 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTSBP07858 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.38■□□□□ 0.37
CTSBP07858 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTSBP07858 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTSBP07858 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTSBP07858 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTSBP07858 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTSBP07858 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.38■□□□□ 0.37
CTSBP07858 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTSBP07858 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.38■□□□□ 0.37
CTSBP07858 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.38■□□□□ 0.37
CTSBP07858 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
CTSBP07858 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.38■□□□□ 0.37
CTSBP07858 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.38■□□□□ 0.37
CTSBP07858 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.38■□□□□ 0.37
CTSBP07858 AC092329.2-201ENST00000598402 547 ntBASIC17.38■□□□□ 0.37
CTSBP07858 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTSBP07858 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTSBP07858 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTSBP07858 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTSBP07858 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.38■□□□□ 0.37
CTSBP07858 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTSBP07858 AL353692.3-201ENST00000407031 1396 ntBASIC17.38■□□□□ 0.37
CTSBP07858 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTSBP07858 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.38■□□□□ 0.37
CTSBP07858 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.38■□□□□ 0.37
CTSBP07858 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CTSBP07858 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.37■□□□□ 0.37
CTSBP07858 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CTSBP07858 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTSBP07858 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.37■□□□□ 0.37
CTSBP07858 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.37■□□□□ 0.37
CTSBP07858 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CTSBP07858 AC091607.1-201ENST00000490318 1060 ntBASIC17.37■□□□□ 0.37
CTSBP07858 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.37■□□□□ 0.37
CTSBP07858 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTSBP07858 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.37■□□□□ 0.37
CTSBP07858 TPSP2-201ENST00000561760 610 ntBASIC17.37■□□□□ 0.37
CTSBP07858 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CTSBP07858 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CTSBP07858 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTSBP07858 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CTSBP07858 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTSBP07858 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CTSBP07858 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTSBP07858 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTSBP07858 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.37■□□□□ 0.37
CTSBP07858 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CTSBP07858 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSBP07858 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTSBP07858 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSBP07858 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CTSBP07858 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTSBP07858 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSBP07858 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSBP07858 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSBP07858 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTSBP07858 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSBP07858 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTSBP07858 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.36■□□□□ 0.37
CTSBP07858 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.36■□□□□ 0.37
CTSBP07858 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.36■□□□□ 0.37
CTSBP07858 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTSBP07858 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTSBP07858 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.36■□□□□ 0.37
CTSBP07858 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.36■□□□□ 0.37
CTSBP07858 AC104581.1-202ENST00000635932 2618 ntBASIC17.36■□□□□ 0.37
CTSBP07858 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.36■□□□□ 0.37
CTSBP07858 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSBP07858 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSBP07858 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.36■□□□□ 0.37
CTSBP07858 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSBP07858 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSBP07858 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTSBP07858 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTSBP07858 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTSBP07858 ESPNP-201ENST00000270691 2015 ntBASIC17.35■□□□□ 0.37
CTSBP07858 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTSBP07858 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTSBP07858 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.35■□□□□ 0.37
CTSBP07858 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTSBP07858 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms