Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC009947.1-201ENST00000444350 727 ntBASIC24.12■■□□□ 1.45
COL5A2P05997 DNAJB3-202ENST00000449667 1266 ntBASIC24.12■■□□□ 1.45
COL5A2P05997 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL5A2P05997 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC24.12■■□□□ 1.45
COL5A2P05997 AC002347.1-201ENST00000569543 541 ntBASIC24.12■■□□□ 1.45
COL5A2P05997 NKAPP1-205ENST00000585790 367 ntBASIC24.12■■□□□ 1.45
COL5A2P05997 AC083906.6-201ENST00000641366 219 ntBASIC24.12■■□□□ 1.45
COL5A2P05997 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL5A2P05997 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL5A2P05997 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
COL5A2P05997 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC24.11■■□□□ 1.45
COL5A2P05997 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
COL5A2P05997 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL5A2P05997 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL5A2P05997 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC24.11■■□□□ 1.45
COL5A2P05997 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC24.11■■□□□ 1.45
COL5A2P05997 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC24.11■■□□□ 1.45
COL5A2P05997 LAGE3P1-201ENST00000425356 484 ntBASIC24.11■■□□□ 1.45
COL5A2P05997 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL5A2P05997 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
COL5A2P05997 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC24.11■■□□□ 1.45
COL5A2P05997 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
COL5A2P05997 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
COL5A2P05997 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
COL5A2P05997 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL5A2P05997 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
COL5A2P05997 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL5A2P05997 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC24.1■■□□□ 1.45
COL5A2P05997 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC24.1■■□□□ 1.45
COL5A2P05997 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL5A2P05997 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL5A2P05997 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL5A2P05997 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL5A2P05997 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL5A2P05997 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC24.1■■□□□ 1.45
COL5A2P05997 COA5-202ENST00000409997 557 ntTSL 4 BASIC24.1■■□□□ 1.45
COL5A2P05997 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC24.1■■□□□ 1.45
COL5A2P05997 AP006288.1-201ENST00000446065 395 ntBASIC24.1■■□□□ 1.45
COL5A2P05997 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC24.1■■□□□ 1.45
COL5A2P05997 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC24.1■■□□□ 1.45
COL5A2P05997 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL5A2P05997 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
COL5A2P05997 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
COL5A2P05997 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COL5A2P05997 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL5A2P05997 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC24.09■■□□□ 1.45
COL5A2P05997 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL5A2P05997 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL5A2P05997 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC24.09■■□□□ 1.45
COL5A2P05997 MIR3687-2-201ENST00000577708 61 ntBASIC24.09■■□□□ 1.45
COL5A2P05997 MIR3687-1-201ENST00000614492 61 ntBASIC24.09■■□□□ 1.45
COL5A2P05997 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC24.09■■□□□ 1.45
COL5A2P05997 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC24.09■■□□□ 1.45
COL5A2P05997 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL5A2P05997 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL5A2P05997 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
COL5A2P05997 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL5A2P05997 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL5A2P05997 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
COL5A2P05997 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
COL5A2P05997 INIP-202ENST00000374236 874 ntTSL 2 BASIC24.08■■□□□ 1.45
COL5A2P05997 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL5A2P05997 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
COL5A2P05997 KRT18P27-201ENST00000427733 1299 ntBASIC24.08■■□□□ 1.45
COL5A2P05997 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC24.08■■□□□ 1.45
COL5A2P05997 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC24.08■■□□□ 1.45
COL5A2P05997 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC24.08■■□□□ 1.45
COL5A2P05997 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC24.08■■□□□ 1.45
COL5A2P05997 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
COL5A2P05997 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
COL5A2P05997 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
COL5A2P05997 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL5A2P05997 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL5A2P05997 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
COL5A2P05997 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC24.08■■□□□ 1.45
COL5A2P05997 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL5A2P05997 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL5A2P05997 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
COL5A2P05997 LINC00602-201ENST00000629776 2065 ntBASIC24.08■■□□□ 1.44
COL5A2P05997 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
COL5A2P05997 SOD2-201ENST00000337404 991 ntTSL 2 BASIC24.07■■□□□ 1.44
COL5A2P05997 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC24.07■■□□□ 1.44
COL5A2P05997 KRT18P65-201ENST00000439811 1286 ntBASIC24.07■■□□□ 1.44
COL5A2P05997 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC24.07■■□□□ 1.44
COL5A2P05997 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL5A2P05997 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
COL5A2P05997 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC24.07■■□□□ 1.44
COL5A2P05997 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC24.07■■□□□ 1.44
COL5A2P05997 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC24.07■■□□□ 1.44
COL5A2P05997 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL5A2P05997 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC24.07■■□□□ 1.44
COL5A2P05997 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
COL5A2P05997 AL158211.5-201ENST00000623583 2518 ntBASIC24.07■■□□□ 1.44
COL5A2P05997 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC24.07■■□□□ 1.44
COL5A2P05997 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL5A2P05997 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
COL5A2P05997 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC24.07■■□□□ 1.44
COL5A2P05997 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
COL5A2P05997 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC24.07■■□□□ 1.44
COL5A2P05997 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms