Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPNS1P04632 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CAPNS1P04632 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPNS1P04632 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CAPNS1P04632 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CAPNS1P04632 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.29■□□□□ 0.52
CAPNS1P04632 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPNS1P04632 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPNS1P04632 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPNS1P04632 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPNS1P04632 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CAPNS1P04632 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPNS1P04632 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPNS1P04632 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPNS1P04632 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPNS1P04632 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPNS1P04632 AL645929.1-201ENST00000420084 975 ntBASIC18.28■□□□□ 0.52
CAPNS1P04632 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.28■□□□□ 0.52
CAPNS1P04632 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.28■□□□□ 0.52
CAPNS1P04632 AC117500.6-201ENST00000624871 588 ntBASIC18.28■□□□□ 0.52
CAPNS1P04632 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.28■□□□□ 0.52
CAPNS1P04632 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
CAPNS1P04632 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPNS1P04632 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPNS1P04632 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CAPNS1P04632 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPNS1P04632 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CAPNS1P04632 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPNS1P04632 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPNS1P04632 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CAPNS1P04632 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPNS1P04632 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.28■□□□□ 0.52
CAPNS1P04632 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CAPNS1P04632 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CAPNS1P04632 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CAPNS1P04632 TEX21P-204ENST00000641479 1693 ntBASIC18.28■□□□□ 0.52
CAPNS1P04632 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.28■□□□□ 0.52
CAPNS1P04632 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CAPNS1P04632 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.27■□□□□ 0.52
CAPNS1P04632 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPNS1P04632 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPNS1P04632 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPNS1P04632 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPNS1P04632 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CAPNS1P04632 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CAPNS1P04632 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CAPNS1P04632 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CAPNS1P04632 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.27■□□□□ 0.52
CAPNS1P04632 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.27■□□□□ 0.52
CAPNS1P04632 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.27■□□□□ 0.52
CAPNS1P04632 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.27■□□□□ 0.52
CAPNS1P04632 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
CAPNS1P04632 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.27■□□□□ 0.52
CAPNS1P04632 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CAPNS1P04632 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CAPNS1P04632 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CAPNS1P04632 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CAPNS1P04632 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.27■□□□□ 0.51
CAPNS1P04632 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.26■□□□□ 0.51
CAPNS1P04632 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.26■□□□□ 0.51
CAPNS1P04632 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CAPNS1P04632 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CAPNS1P04632 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CAPNS1P04632 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
CAPNS1P04632 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.26■□□□□ 0.51
CAPNS1P04632 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CAPNS1P04632 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CAPNS1P04632 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPNS1P04632 AP002469.2-201ENST00000531724 424 ntBASIC18.26■□□□□ 0.51
CAPNS1P04632 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
CAPNS1P04632 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.26■□□□□ 0.51
CAPNS1P04632 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.26■□□□□ 0.51
CAPNS1P04632 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CAPNS1P04632 AL732292.2-201ENST00000609649 430 ntBASIC18.26■□□□□ 0.51
CAPNS1P04632 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CAPNS1P04632 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPNS1P04632 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.26■□□□□ 0.51
CAPNS1P04632 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CAPNS1P04632 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPNS1P04632 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CAPNS1P04632 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CAPNS1P04632 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.26■□□□□ 0.51
CAPNS1P04632 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPNS1P04632 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPNS1P04632 AC018553.1-201ENST00000616682 1458 ntBASIC18.26■□□□□ 0.51
CAPNS1P04632 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPNS1P04632 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CAPNS1P04632 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.25■□□□□ 0.51
CAPNS1P04632 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CAPNS1P04632 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CAPNS1P04632 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.25■□□□□ 0.51
CAPNS1P04632 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms