Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP3BO95985 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TOP3BO95985 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
TOP3BO95985 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TOP3BO95985 RCC2P6-201ENST00000526625 1557 ntBASIC18.85■□□□□ 0.61
TOP3BO95985 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.84■□□□□ 0.61
TOP3BO95985 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.84■□□□□ 0.61
TOP3BO95985 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TOP3BO95985 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
TOP3BO95985 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.84■□□□□ 0.61
TOP3BO95985 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.84■□□□□ 0.61
TOP3BO95985 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TOP3BO95985 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TOP3BO95985 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TOP3BO95985 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.84■□□□□ 0.61
TOP3BO95985 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.84■□□□□ 0.61
TOP3BO95985 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.84■□□□□ 0.61
TOP3BO95985 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.84■□□□□ 0.61
TOP3BO95985 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
TOP3BO95985 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
TOP3BO95985 AC140113.3-201ENST00000605663 199 ntBASIC18.84■□□□□ 0.61
TOP3BO95985 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.84■□□□□ 0.61
TOP3BO95985 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TOP3BO95985 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.84■□□□□ 0.61
TOP3BO95985 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TOP3BO95985 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.84■□□□□ 0.61
TOP3BO95985 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.84■□□□□ 0.61
TOP3BO95985 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TOP3BO95985 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.84■□□□□ 0.61
TOP3BO95985 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TOP3BO95985 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TOP3BO95985 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TOP3BO95985 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.83■□□□□ 0.61
TOP3BO95985 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.83■□□□□ 0.61
TOP3BO95985 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TOP3BO95985 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TOP3BO95985 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TOP3BO95985 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TOP3BO95985 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TOP3BO95985 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TOP3BO95985 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.83■□□□□ 0.61
TOP3BO95985 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TOP3BO95985 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TOP3BO95985 AC068880.1-201ENST00000507289 2297 ntBASIC18.83■□□□□ 0.61
TOP3BO95985 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TOP3BO95985 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TOP3BO95985 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TOP3BO95985 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.83■□□□□ 0.6
TOP3BO95985 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.83■□□□□ 0.6
TOP3BO95985 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
TOP3BO95985 AC010653.2-201ENST00000623505 997 ntBASIC18.83■□□□□ 0.6
TOP3BO95985 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TOP3BO95985 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TOP3BO95985 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TOP3BO95985 AL499627.1-201ENST00000569373 2188 ntBASIC18.83■□□□□ 0.6
TOP3BO95985 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TOP3BO95985 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TOP3BO95985 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TOP3BO95985 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TOP3BO95985 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TOP3BO95985 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TOP3BO95985 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TOP3BO95985 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.83■□□□□ 0.6
TOP3BO95985 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
TOP3BO95985 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TOP3BO95985 AC092338.2-201ENST00000568827 1415 ntBASIC18.83■□□□□ 0.6
TOP3BO95985 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP3BO95985 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP3BO95985 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP3BO95985 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP3BO95985 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP3BO95985 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.82■□□□□ 0.6
TOP3BO95985 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP3BO95985 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TOP3BO95985 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TOP3BO95985 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.82■□□□□ 0.6
TOP3BO95985 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.82■□□□□ 0.6
TOP3BO95985 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.82■□□□□ 0.6
TOP3BO95985 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TOP3BO95985 AL136038.3-201ENST00000561909 1096 ntBASIC18.82■□□□□ 0.6
TOP3BO95985 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms