Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC11.28□□□□□ -0.6
HERC2O95714 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HERC2O95714 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.28□□□□□ -0.6
HERC2O95714 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
HERC2O95714 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HERC2O95714 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
HERC2O95714 AC125807.1-201ENST00000483097 614 ntBASIC11.28□□□□□ -0.6
HERC2O95714 GIMAP3P-201ENST00000495150 836 ntBASIC11.28□□□□□ -0.6
HERC2O95714 GLI4-203ENST00000517468 963 ntTSL 5 BASIC11.28□□□□□ -0.6
HERC2O95714 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
HERC2O95714 BAD-207ENST00000544785 525 ntTSL 3 BASIC11.28□□□□□ -0.6
HERC2O95714 ANKRD18DP-204ENST00000455355 1975 ntBASIC11.28□□□□□ -0.6
HERC2O95714 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.28□□□□□ -0.6
HERC2O95714 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HERC2O95714 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
HERC2O95714 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
HERC2O95714 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC11.28□□□□□ -0.6
HERC2O95714 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC11.28□□□□□ -0.6
HERC2O95714 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HERC2O95714 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HERC2O95714 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
HERC2O95714 CRYGEP-201ENST00000412192 528 ntBASIC11.28□□□□□ -0.6
HERC2O95714 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.28□□□□□ -0.6
HERC2O95714 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HERC2O95714 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HERC2O95714 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC11.28□□□□□ -0.6
HERC2O95714 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
HERC2O95714 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC11.28□□□□□ -0.6
HERC2O95714 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
HERC2O95714 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HERC2O95714 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
HERC2O95714 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HERC2O95714 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
HERC2O95714 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
HERC2O95714 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.28□□□□□ -0.6
HERC2O95714 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
HERC2O95714 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC11.28□□□□□ -0.6
HERC2O95714 AC096734.2-201ENST00000562054 433 ntBASIC11.28□□□□□ -0.6
HERC2O95714 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC11.28□□□□□ -0.6
HERC2O95714 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HERC2O95714 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
HERC2O95714 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HERC2O95714 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
HERC2O95714 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
HERC2O95714 PPA1-206ENST00000625364 644 ntTSL 5 BASIC11.28□□□□□ -0.6
HERC2O95714 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC11.28□□□□□ -0.6
HERC2O95714 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
HERC2O95714 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
HERC2O95714 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC11.27□□□□□ -0.6
HERC2O95714 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.6
HERC2O95714 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
HERC2O95714 AC019129.2-201ENST00000609837 1235 ntBASIC11.27□□□□□ -0.6
HERC2O95714 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
HERC2O95714 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HERC2O95714 KRT8P44-201ENST00000441609 1350 ntBASIC11.27□□□□□ -0.61
HERC2O95714 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
HERC2O95714 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HERC2O95714 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
HERC2O95714 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.27□□□□□ -0.61
HERC2O95714 MXI1-205ENST00000393134 889 ntTSL 2 BASIC11.27□□□□□ -0.61
HERC2O95714 FXNP2-201ENST00000411625 547 ntBASIC11.27□□□□□ -0.61
HERC2O95714 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
HERC2O95714 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
HERC2O95714 AC004890.2-204ENST00000481968 304 ntBASIC11.27□□□□□ -0.61
HERC2O95714 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
HERC2O95714 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC11.27□□□□□ -0.61
HERC2O95714 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HERC2O95714 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HERC2O95714 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HERC2O95714 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
HERC2O95714 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC11.27□□□□□ -0.61
HERC2O95714 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
HERC2O95714 PTPA-220ENST00000436883 532 ntTSL 4 BASIC11.27□□□□□ -0.61
HERC2O95714 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC11.27□□□□□ -0.61
HERC2O95714 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.27□□□□□ -0.61
HERC2O95714 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
HERC2O95714 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HERC2O95714 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
HERC2O95714 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
HERC2O95714 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
HERC2O95714 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC11.27□□□□□ -0.61
HERC2O95714 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC11.27□□□□□ -0.61
HERC2O95714 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HERC2O95714 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HERC2O95714 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
HERC2O95714 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
HERC2O95714 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC11.26□□□□□ -0.61
HERC2O95714 DGCR5-201ENST00000399539 862 ntBASIC11.26□□□□□ -0.61
HERC2O95714 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HERC2O95714 AC097493.3-201ENST00000509725 367 ntBASIC11.26□□□□□ -0.61
HERC2O95714 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC11.26□□□□□ -0.61
HERC2O95714 FOS-206ENST00000555347 1280 ntTSL 2 BASIC11.26□□□□□ -0.61
HERC2O95714 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC11.26□□□□□ -0.61
HERC2O95714 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
HERC2O95714 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HERC2O95714 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC11.26□□□□□ -0.61
HERC2O95714 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
HERC2O95714 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HERC2O95714 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HERC2O95714 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms