Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.35■□□□□ 0.21
CNOT4O95628 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.35■□□□□ 0.21
CNOT4O95628 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNOT4O95628 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNOT4O95628 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNOT4O95628 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.35■□□□□ 0.21
CNOT4O95628 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CNOT4O95628 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNOT4O95628 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CNOT4O95628 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT4O95628 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT4O95628 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CNOT4O95628 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT4O95628 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT4O95628 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.34■□□□□ 0.21
CNOT4O95628 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.34■□□□□ 0.21
CNOT4O95628 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CNOT4O95628 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT4O95628 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CNOT4O95628 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT4O95628 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT4O95628 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT4O95628 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.34■□□□□ 0.21
CNOT4O95628 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
CNOT4O95628 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.34■□□□□ 0.21
CNOT4O95628 AL671277.2-201ENST00000458060 996 ntBASIC16.34■□□□□ 0.21
CNOT4O95628 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.34■□□□□ 0.21
CNOT4O95628 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.34■□□□□ 0.21
CNOT4O95628 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT4O95628 AC010240.3-201ENST00000607688 395 ntBASIC16.34■□□□□ 0.21
CNOT4O95628 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.34■□□□□ 0.21
CNOT4O95628 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT4O95628 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT4O95628 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.34■□□□□ 0.21
CNOT4O95628 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.34■□□□□ 0.21
CNOT4O95628 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT4O95628 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT4O95628 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.34■□□□□ 0.21
CNOT4O95628 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CNOT4O95628 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT4O95628 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT4O95628 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CNOT4O95628 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT4O95628 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CNOT4O95628 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNOT4O95628 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CNOT4O95628 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CNOT4O95628 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
CNOT4O95628 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CNOT4O95628 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CNOT4O95628 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CNOT4O95628 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
CNOT4O95628 AL049812.1-201ENST00000432563 2267 ntBASIC16.33■□□□□ 0.2
CNOT4O95628 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT4O95628 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT4O95628 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT4O95628 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT4O95628 AC112907.2-201ENST00000448639 330 ntBASIC16.33■□□□□ 0.2
CNOT4O95628 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.33■□□□□ 0.2
CNOT4O95628 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT4O95628 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.33■□□□□ 0.2
CNOT4O95628 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.33■□□□□ 0.2
CNOT4O95628 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
CNOT4O95628 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.33■□□□□ 0.2
CNOT4O95628 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.33■□□□□ 0.2
CNOT4O95628 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.33■□□□□ 0.2
CNOT4O95628 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT4O95628 AC112777.1-201ENST00000540175 1423 ntBASIC16.33■□□□□ 0.2
CNOT4O95628 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CNOT4O95628 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT4O95628 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.33■□□□□ 0.2
CNOT4O95628 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT4O95628 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.33■□□□□ 0.2
CNOT4O95628 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CNOT4O95628 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CNOT4O95628 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT4O95628 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT4O95628 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.33■□□□□ 0.2
CNOT4O95628 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT4O95628 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CNOT4O95628 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT4O95628 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT4O95628 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT4O95628 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT4O95628 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT4O95628 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CNOT4O95628 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.32■□□□□ 0.2
CNOT4O95628 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CNOT4O95628 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms