Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSPG5O95196 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.72■□□□□ 0.75
CSPG5O95196 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CSPG5O95196 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.72■□□□□ 0.75
CSPG5O95196 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSPG5O95196 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CSPG5O95196 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSPG5O95196 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CSPG5O95196 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSPG5O95196 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
CSPG5O95196 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSPG5O95196 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSPG5O95196 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CSPG5O95196 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSPG5O95196 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSPG5O95196 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSPG5O95196 MIR564-202ENST00000385049 94 ntBASIC19.71■□□□□ 0.75
CSPG5O95196 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.71■□□□□ 0.75
CSPG5O95196 FAM197Y8-203ENST00000450145 560 ntBASIC19.71■□□□□ 0.75
CSPG5O95196 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.71■□□□□ 0.75
CSPG5O95196 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.71■□□□□ 0.75
CSPG5O95196 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.71■□□□□ 0.75
CSPG5O95196 AC148477.8-201ENST00000624298 468 ntBASIC19.71■□□□□ 0.75
CSPG5O95196 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSPG5O95196 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSPG5O95196 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSPG5O95196 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSPG5O95196 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSPG5O95196 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSPG5O95196 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CSPG5O95196 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.71■□□□□ 0.75
CSPG5O95196 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSPG5O95196 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CSPG5O95196 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CSPG5O95196 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CSPG5O95196 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.7■□□□□ 0.74
CSPG5O95196 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.7■□□□□ 0.74
CSPG5O95196 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.7■□□□□ 0.74
CSPG5O95196 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSPG5O95196 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.7■□□□□ 0.74
CSPG5O95196 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSPG5O95196 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSPG5O95196 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSPG5O95196 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CSPG5O95196 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSPG5O95196 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CSPG5O95196 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSPG5O95196 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSPG5O95196 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSPG5O95196 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.7■□□□□ 0.74
CSPG5O95196 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSPG5O95196 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.7■□□□□ 0.74
CSPG5O95196 AC096582.2-201ENST00000510860 516 ntBASIC19.7■□□□□ 0.74
CSPG5O95196 AC024563.2-201ENST00000603282 481 ntBASIC19.7■□□□□ 0.74
CSPG5O95196 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSPG5O95196 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.7■□□□□ 0.74
CSPG5O95196 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.7■□□□□ 0.74
CSPG5O95196 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
CSPG5O95196 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.7■□□□□ 0.74
CSPG5O95196 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.7■□□□□ 0.74
CSPG5O95196 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSPG5O95196 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.7■□□□□ 0.74
CSPG5O95196 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSPG5O95196 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
CSPG5O95196 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.7■□□□□ 0.74
CSPG5O95196 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CSPG5O95196 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSPG5O95196 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSPG5O95196 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CSPG5O95196 HOXB1-202ENST00000577092 1414 ntBASIC19.69■□□□□ 0.74
CSPG5O95196 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CSPG5O95196 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSPG5O95196 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CSPG5O95196 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSPG5O95196 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSPG5O95196 MIR574-201ENST00000385209 96 ntBASIC19.69■□□□□ 0.74
CSPG5O95196 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.69■□□□□ 0.74
CSPG5O95196 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CSPG5O95196 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.69■□□□□ 0.74
CSPG5O95196 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSPG5O95196 TREX1-205ENST00000625293 1783 ntBASIC19.69■□□□□ 0.74
CSPG5O95196 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSPG5O95196 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.69■□□□□ 0.74
CSPG5O95196 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSPG5O95196 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSPG5O95196 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSPG5O95196 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CSPG5O95196 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSPG5O95196 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSPG5O95196 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CSPG5O95196 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.68■□□□□ 0.74
CSPG5O95196 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.68■□□□□ 0.74
CSPG5O95196 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSPG5O95196 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CSPG5O95196 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CSPG5O95196 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSPG5O95196 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.68■□□□□ 0.74
CSPG5O95196 PMS2P1-201ENST00000431037 1228 ntBASIC19.68■□□□□ 0.74
CSPG5O95196 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CSPG5O95196 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms