Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PFDN1O60925 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PFDN1O60925 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PFDN1O60925 AC105917.1-201ENST00000506637 2539 ntBASIC16.47■□□□□ 0.23
PFDN1O60925 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PFDN1O60925 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PFDN1O60925 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.46■□□□□ 0.23
PFDN1O60925 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PFDN1O60925 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PFDN1O60925 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.46■□□□□ 0.23
PFDN1O60925 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PFDN1O60925 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.46■□□□□ 0.23
PFDN1O60925 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
PFDN1O60925 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PFDN1O60925 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.46■□□□□ 0.23
PFDN1O60925 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.46■□□□□ 0.23
PFDN1O60925 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PFDN1O60925 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PFDN1O60925 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PFDN1O60925 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.46■□□□□ 0.23
PFDN1O60925 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PFDN1O60925 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.46■□□□□ 0.23
PFDN1O60925 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PFDN1O60925 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PFDN1O60925 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PFDN1O60925 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.46■□□□□ 0.23
PFDN1O60925 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.46■□□□□ 0.23
PFDN1O60925 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PFDN1O60925 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PFDN1O60925 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.46■□□□□ 0.23
PFDN1O60925 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PFDN1O60925 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PFDN1O60925 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PFDN1O60925 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PFDN1O60925 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PFDN1O60925 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PFDN1O60925 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PFDN1O60925 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.46■□□□□ 0.22
PFDN1O60925 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.46■□□□□ 0.22
PFDN1O60925 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
PFDN1O60925 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PFDN1O60925 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PFDN1O60925 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.45■□□□□ 0.22
PFDN1O60925 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PFDN1O60925 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
PFDN1O60925 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.45■□□□□ 0.22
PFDN1O60925 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.45■□□□□ 0.22
PFDN1O60925 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PFDN1O60925 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.45■□□□□ 0.22
PFDN1O60925 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.45■□□□□ 0.22
PFDN1O60925 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 RPS2-202ENST00000526522 924 ntTSL 2 BASIC16.45■□□□□ 0.22
PFDN1O60925 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PFDN1O60925 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.45■□□□□ 0.22
PFDN1O60925 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PFDN1O60925 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
PFDN1O60925 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PFDN1O60925 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 AGGF1P2-201ENST00000426656 2106 ntBASIC16.45■□□□□ 0.22
PFDN1O60925 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.45■□□□□ 0.22
PFDN1O60925 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.45■□□□□ 0.22
PFDN1O60925 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.45■□□□□ 0.22
PFDN1O60925 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PFDN1O60925 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.45■□□□□ 0.22
PFDN1O60925 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PFDN1O60925 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.45■□□□□ 0.22
PFDN1O60925 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PFDN1O60925 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
PFDN1O60925 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.44■□□□□ 0.22
PFDN1O60925 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN1O60925 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
PFDN1O60925 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
PFDN1O60925 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN1O60925 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN1O60925 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.44■□□□□ 0.22
PFDN1O60925 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.44■□□□□ 0.22
PFDN1O60925 AC129492.7-201ENST00000622992 756 ntBASIC16.44■□□□□ 0.22
PFDN1O60925 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN1O60925 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN1O60925 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN1O60925 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN1O60925 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PFDN1O60925 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms