Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PLOD3O60568 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PLOD3O60568 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PLOD3O60568 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.33■□□□□ 0.37
PLOD3O60568 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PLOD3O60568 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PLOD3O60568 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PLOD3O60568 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PLOD3O60568 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.33■□□□□ 0.36
PLOD3O60568 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PLOD3O60568 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.33■□□□□ 0.36
PLOD3O60568 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PLOD3O60568 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PLOD3O60568 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PLOD3O60568 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PLOD3O60568 ECEL1P2-202ENST00000465689 757 ntBASIC17.33■□□□□ 0.36
PLOD3O60568 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.33■□□□□ 0.36
PLOD3O60568 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PLOD3O60568 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PLOD3O60568 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.33■□□□□ 0.36
PLOD3O60568 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PLOD3O60568 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.33■□□□□ 0.36
PLOD3O60568 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PLOD3O60568 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PLOD3O60568 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PLOD3O60568 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PLOD3O60568 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PLOD3O60568 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.33■□□□□ 0.36
PLOD3O60568 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PLOD3O60568 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PLOD3O60568 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PLOD3O60568 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PLOD3O60568 AC009113.1-201ENST00000570267 2443 ntBASIC17.32■□□□□ 0.36
PLOD3O60568 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.32■□□□□ 0.36
PLOD3O60568 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PLOD3O60568 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.32■□□□□ 0.36
PLOD3O60568 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PLOD3O60568 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PLOD3O60568 KRT8P50-201ENST00000562022 1438 ntBASIC17.32■□□□□ 0.36
PLOD3O60568 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PLOD3O60568 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.32■□□□□ 0.36
PLOD3O60568 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PLOD3O60568 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PLOD3O60568 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PLOD3O60568 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PLOD3O60568 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PLOD3O60568 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PLOD3O60568 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.32■□□□□ 0.36
PLOD3O60568 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PLOD3O60568 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.32■□□□□ 0.36
PLOD3O60568 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.32■□□□□ 0.36
PLOD3O60568 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PLOD3O60568 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.32■□□□□ 0.36
PLOD3O60568 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.32■□□□□ 0.36
PLOD3O60568 AC073912.3-201ENST00000624414 853 ntBASIC17.32■□□□□ 0.36
PLOD3O60568 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.32■□□□□ 0.36
PLOD3O60568 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.32■□□□□ 0.36
PLOD3O60568 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PLOD3O60568 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PLOD3O60568 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PLOD3O60568 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PLOD3O60568 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PLOD3O60568 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PLOD3O60568 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PLOD3O60568 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PLOD3O60568 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PLOD3O60568 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PLOD3O60568 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PLOD3O60568 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PLOD3O60568 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.31■□□□□ 0.36
PLOD3O60568 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PLOD3O60568 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PLOD3O60568 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PLOD3O60568 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.31■□□□□ 0.36
PLOD3O60568 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PLOD3O60568 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PLOD3O60568 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PLOD3O60568 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PLOD3O60568 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PLOD3O60568 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.31■□□□□ 0.36
PLOD3O60568 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.31■□□□□ 0.36
PLOD3O60568 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.31■□□□□ 0.36
PLOD3O60568 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.31■□□□□ 0.36
PLOD3O60568 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.31■□□□□ 0.36
PLOD3O60568 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.31■□□□□ 0.36
PLOD3O60568 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.31■□□□□ 0.36
PLOD3O60568 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.31■□□□□ 0.36
PLOD3O60568 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.31■□□□□ 0.36
PLOD3O60568 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PLOD3O60568 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PLOD3O60568 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.31■□□□□ 0.36
PLOD3O60568 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PLOD3O60568 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PLOD3O60568 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.31■□□□□ 0.36
PLOD3O60568 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PLOD3O60568 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PLOD3O60568 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PLOD3O60568 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.31■□□□□ 0.36
PLOD3O60568 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.31■□□□□ 0.36
PLOD3O60568 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms