Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 AC034105.1-201ENST00000563488 319 ntBASIC17.34■□□□□ 0.37
URB1O60287 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.34■□□□□ 0.37
URB1O60287 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
URB1O60287 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
URB1O60287 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.34■□□□□ 0.37
URB1O60287 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
URB1O60287 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
URB1O60287 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
URB1O60287 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
URB1O60287 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.34■□□□□ 0.37
URB1O60287 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.33■□□□□ 0.37
URB1O60287 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
URB1O60287 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.33■□□□□ 0.37
URB1O60287 AL035633.1-201ENST00000406139 838 ntBASIC17.33■□□□□ 0.37
URB1O60287 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.33■□□□□ 0.37
URB1O60287 AC096582.2-201ENST00000510860 516 ntBASIC17.33■□□□□ 0.37
URB1O60287 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.33■□□□□ 0.37
URB1O60287 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.33■□□□□ 0.37
URB1O60287 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
URB1O60287 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
URB1O60287 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
URB1O60287 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.33■□□□□ 0.37
URB1O60287 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
URB1O60287 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
URB1O60287 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.33■□□□□ 0.36
URB1O60287 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
URB1O60287 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
URB1O60287 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
URB1O60287 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.33■□□□□ 0.36
URB1O60287 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
URB1O60287 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
URB1O60287 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.33■□□□□ 0.36
URB1O60287 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.33■□□□□ 0.36
URB1O60287 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
URB1O60287 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
URB1O60287 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
URB1O60287 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
URB1O60287 AC099778.1-201ENST00000568593 1911 ntBASIC17.33■□□□□ 0.36
URB1O60287 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.33■□□□□ 0.36
URB1O60287 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
URB1O60287 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.33■□□□□ 0.36
URB1O60287 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
URB1O60287 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.33■□□□□ 0.36
URB1O60287 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
URB1O60287 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
URB1O60287 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
URB1O60287 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
URB1O60287 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
URB1O60287 AC112482.1-201ENST00000492080 688 ntBASIC17.32■□□□□ 0.36
URB1O60287 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.32■□□□□ 0.36
URB1O60287 MIR3197-201ENST00000582241 73 ntBASIC17.32■□□□□ 0.36
URB1O60287 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
URB1O60287 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
URB1O60287 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
URB1O60287 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
URB1O60287 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
URB1O60287 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
URB1O60287 SDHAP1-207ENST00000440850 2000 ntBASIC17.32■□□□□ 0.36
URB1O60287 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
URB1O60287 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
URB1O60287 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
URB1O60287 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.32■□□□□ 0.36
URB1O60287 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.32■□□□□ 0.36
URB1O60287 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.32■□□□□ 0.36
URB1O60287 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
URB1O60287 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
URB1O60287 MTDHP3-201ENST00000594186 672 ntBASIC17.32■□□□□ 0.36
URB1O60287 AFG3L1P-217ENST00000557444 2447 ntBASIC17.32■□□□□ 0.36
URB1O60287 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
URB1O60287 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
URB1O60287 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.32■□□□□ 0.36
URB1O60287 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.32■□□□□ 0.36
URB1O60287 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
URB1O60287 AC020907.5-201ENST00000624372 1936 ntBASIC17.32■□□□□ 0.36
URB1O60287 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
URB1O60287 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
URB1O60287 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
URB1O60287 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
URB1O60287 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
URB1O60287 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
URB1O60287 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
URB1O60287 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
URB1O60287 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.31■□□□□ 0.36
URB1O60287 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
URB1O60287 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
URB1O60287 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.31■□□□□ 0.36
URB1O60287 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.31■□□□□ 0.36
URB1O60287 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.31■□□□□ 0.36
URB1O60287 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.31■□□□□ 0.36
URB1O60287 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
URB1O60287 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
URB1O60287 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.31■□□□□ 0.36
URB1O60287 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
URB1O60287 KRT89P-201ENST00000620027 1478 ntBASIC17.31■□□□□ 0.36
URB1O60287 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
URB1O60287 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.31■□□□□ 0.36
URB1O60287 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.31■□□□□ 0.36
URB1O60287 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
URB1O60287 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.31■□□□□ 0.36
URB1O60287 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms