Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.7■□□□□ 0.58
RIPK2O43353 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RIPK2O43353 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.7■□□□□ 0.58
RIPK2O43353 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RIPK2O43353 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
RIPK2O43353 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.7■□□□□ 0.58
RIPK2O43353 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RIPK2O43353 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.7■□□□□ 0.58
RIPK2O43353 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RIPK2O43353 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RIPK2O43353 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RIPK2O43353 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.69■□□□□ 0.58
RIPK2O43353 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.69■□□□□ 0.58
RIPK2O43353 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RIPK2O43353 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.69■□□□□ 0.58
RIPK2O43353 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.69■□□□□ 0.58
RIPK2O43353 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
RIPK2O43353 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.69■□□□□ 0.58
RIPK2O43353 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.69■□□□□ 0.58
RIPK2O43353 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
RIPK2O43353 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RIPK2O43353 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIPK2O43353 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIPK2O43353 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIPK2O43353 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RIPK2O43353 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RIPK2O43353 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RIPK2O43353 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.68■□□□□ 0.58
RIPK2O43353 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIPK2O43353 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIPK2O43353 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RIPK2O43353 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.68■□□□□ 0.58
RIPK2O43353 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.68■□□□□ 0.58
RIPK2O43353 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.68■□□□□ 0.58
RIPK2O43353 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.68■□□□□ 0.58
RIPK2O43353 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.68■□□□□ 0.58
RIPK2O43353 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.68■□□□□ 0.58
RIPK2O43353 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RIPK2O43353 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.68■□□□□ 0.58
RIPK2O43353 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.68■□□□□ 0.58
RIPK2O43353 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.68■□□□□ 0.58
RIPK2O43353 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.68■□□□□ 0.58
RIPK2O43353 AC106820.2-201ENST00000563775 3264 ntBASIC18.68■□□□□ 0.58
RIPK2O43353 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIPK2O43353 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIPK2O43353 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIPK2O43353 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RIPK2O43353 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.68■□□□□ 0.58
RIPK2O43353 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIPK2O43353 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RIPK2O43353 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIPK2O43353 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RIPK2O43353 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RIPK2O43353 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RIPK2O43353 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RIPK2O43353 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RIPK2O43353 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RIPK2O43353 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RIPK2O43353 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RIPK2O43353 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RIPK2O43353 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RIPK2O43353 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RIPK2O43353 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RIPK2O43353 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RIPK2O43353 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RIPK2O43353 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.67■□□□□ 0.58
RIPK2O43353 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.67■□□□□ 0.58
RIPK2O43353 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RIPK2O43353 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RIPK2O43353 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.67■□□□□ 0.58
RIPK2O43353 CKBP1-201ENST00000565489 1086 ntBASIC18.67■□□□□ 0.58
RIPK2O43353 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.67■□□□□ 0.58
RIPK2O43353 AC069544.1-201ENST00000609399 999 ntBASIC18.67■□□□□ 0.58
RIPK2O43353 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
RIPK2O43353 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RIPK2O43353 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RIPK2O43353 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RIPK2O43353 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RIPK2O43353 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RIPK2O43353 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RIPK2O43353 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms