Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2A1O14983 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
ATP2A1O14983 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP2A1O14983 SDHAP2-201ENST00000455183 2001 ntBASIC21.02■□□□□ 0.96
ATP2A1O14983 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
ATP2A1O14983 MYLKP1-201ENST00000509077 1580 ntBASIC21.02■□□□□ 0.95
ATP2A1O14983 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.02■□□□□ 0.95
ATP2A1O14983 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A1O14983 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A1O14983 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.01■□□□□ 0.95
ATP2A1O14983 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A1O14983 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A1O14983 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A1O14983 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A1O14983 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A1O14983 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
ATP2A1O14983 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
ATP2A1O14983 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A1O14983 KRT16P4-201ENST00000453883 522 ntBASIC21.01■□□□□ 0.95
ATP2A1O14983 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP2A1O14983 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A1O14983 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.01■□□□□ 0.95
ATP2A1O14983 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A1O14983 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A1O14983 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP2A1O14983 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP2A1O14983 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP2A1O14983 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP2A1O14983 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP2A1O14983 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21■□□□□ 0.95
ATP2A1O14983 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP2A1O14983 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP2A1O14983 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ATP2A1O14983 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ATP2A1O14983 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP2A1O14983 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP2A1O14983 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP2A1O14983 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP2A1O14983 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ATP2A1O14983 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21■□□□□ 0.95
ATP2A1O14983 AC079781.3-201ENST00000449110 356 ntBASIC21■□□□□ 0.95
ATP2A1O14983 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21■□□□□ 0.95
ATP2A1O14983 AC106795.1-205ENST00000512851 1056 ntBASIC21■□□□□ 0.95
ATP2A1O14983 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21■□□□□ 0.95
ATP2A1O14983 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP2A1O14983 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP2A1O14983 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21■□□□□ 0.95
ATP2A1O14983 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21■□□□□ 0.95
ATP2A1O14983 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP2A1O14983 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ATP2A1O14983 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP2A1O14983 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21■□□□□ 0.95
ATP2A1O14983 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21■□□□□ 0.95
ATP2A1O14983 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ATP2A1O14983 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
ATP2A1O14983 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP2A1O14983 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21■□□□□ 0.95
ATP2A1O14983 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP2A1O14983 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP2A1O14983 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP2A1O14983 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP2A1O14983 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ATP2A1O14983 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP2A1O14983 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.99■□□□□ 0.95
ATP2A1O14983 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP2A1O14983 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.99■□□□□ 0.95
ATP2A1O14983 POM121L3P-201ENST00000419331 1163 ntBASIC20.99■□□□□ 0.95
ATP2A1O14983 AC009078.2-202ENST00000463353 338 ntBASIC20.99■□□□□ 0.95
ATP2A1O14983 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP2A1O14983 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.99■□□□□ 0.95
ATP2A1O14983 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ATP2A1O14983 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ATP2A1O14983 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.99■□□□□ 0.95
ATP2A1O14983 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP2A1O14983 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.99■□□□□ 0.95
ATP2A1O14983 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ATP2A1O14983 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP2A1O14983 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ATP2A1O14983 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP2A1O14983 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
ATP2A1O14983 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP2A1O14983 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP2A1O14983 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP2A1O14983 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2A1O14983 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2A1O14983 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2A1O14983 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2A1O14983 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2A1O14983 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.98■□□□□ 0.95
ATP2A1O14983 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.98■□□□□ 0.95
ATP2A1O14983 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2A1O14983 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2A1O14983 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.98■□□□□ 0.95
ATP2A1O14983 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
ATP2A1O14983 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2A1O14983 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP2A1O14983 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.98■□□□□ 0.95
ATP2A1O14983 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP2A1O14983 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATP2A1O14983 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms