Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.57■□□□□ 0.4
PCDH17O14917 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.57■□□□□ 0.4
PCDH17O14917 AL441883.1-201ENST00000566170 1045 ntBASIC17.57■□□□□ 0.4
PCDH17O14917 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
PCDH17O14917 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH17O14917 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.57■□□□□ 0.4
PCDH17O14917 AC091076.1-201ENST00000610741 619 ntBASIC17.57■□□□□ 0.4
PCDH17O14917 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH17O14917 AL023973.1-201ENST00000624619 620 ntBASIC17.57■□□□□ 0.4
PCDH17O14917 AL121956.5-201ENST00000625261 221 ntBASIC17.57■□□□□ 0.4
PCDH17O14917 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PCDH17O14917 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.57■□□□□ 0.4
PCDH17O14917 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
PCDH17O14917 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH17O14917 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH17O14917 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH17O14917 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH17O14917 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH17O14917 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PCDH17O14917 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.57■□□□□ 0.4
PCDH17O14917 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH17O14917 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH17O14917 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH17O14917 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH17O14917 AL354751.1-201ENST00000412768 1863 ntBASIC17.56■□□□□ 0.4
PCDH17O14917 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
PCDH17O14917 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH17O14917 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDH17O14917 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH17O14917 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH17O14917 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH17O14917 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH17O14917 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PCDH17O14917 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PCDH17O14917 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH17O14917 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH17O14917 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDH17O14917 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCDH17O14917 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH17O14917 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDH17O14917 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.56■□□□□ 0.4
PCDH17O14917 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.56■□□□□ 0.4
PCDH17O14917 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDH17O14917 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH17O14917 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH17O14917 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH17O14917 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDH17O14917 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDH17O14917 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDH17O14917 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDH17O14917 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDH17O14917 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH17O14917 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH17O14917 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH17O14917 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDH17O14917 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH17O14917 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH17O14917 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH17O14917 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH17O14917 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDH17O14917 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDH17O14917 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDH17O14917 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDH17O14917 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDH17O14917 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH17O14917 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PCDH17O14917 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PCDH17O14917 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH17O14917 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH17O14917 ANO7L1-203ENST00000602586 1720 ntBASIC17.55■□□□□ 0.4
PCDH17O14917 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDH17O14917 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH17O14917 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PCDH17O14917 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH17O14917 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDH17O14917 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH17O14917 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDH17O14917 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH17O14917 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH17O14917 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH17O14917 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDH17O14917 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDH17O14917 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
PCDH17O14917 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH17O14917 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCDH17O14917 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH17O14917 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH17O14917 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH17O14917 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH17O14917 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH17O14917 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDH17O14917 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PCDH17O14917 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDH17O14917 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDH17O14917 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PCDH17O14917 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH17O14917 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH17O14917 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH17O14917 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDH17O14917 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms